DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6118 and BtbVII

DIOPT Version :10

Sequence 1:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster
Sequence 2:NP_647774.2 Gene:BtbVII / 38376 FlyBaseID:FBgn0263108 Length:907 Species:Drosophila melanogaster


Alignment Length:594 Identity:140/594 - (23%)
Similarity:217/594 - (36%) Gaps:167/594 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 TIDQYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPSS 453
            ::.|:.|.|||...|......||..:..:||||:||.|:..:|||:|||.||.|||.:|..||..
  Fly     2 SVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQALFTTNPCQ 66

  Fly   454 HPILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSDASDIS--- 515
            |||:::.||:...:..::||||.|:|||..|.||..||.||.:|||||   ..:.:|.::::   
  Fly    67 HPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGL---AEMPTDPANLTKSD 128

  Fly   516 SPHESDGTECRYERGTHSVNITSGHAAGYGGAPS------------------------------- 549
            |...:||||.   .|...|...:|::||..||.|                               
  Fly   129 SKSSTDGTEM---VGGAGVGTGAGNSAGSLGAGSGSSVGDSLWSSSEAQQFQQQQQQQAQQQAQQ 190

  Fly   550 ---------------------------------SQQSSPSPSL----NGPNRCPTPLSSGGSGNP 577
                                             .|||..:.:.    :...|.|:|||:|     
  Fly   191 QHHHHQQQQQLQQQQQQAQQQQQQQQHHHHHHQQQQSGQAQAAQTHHHQMRRTPSPLSAG----- 250

  Fly   578 NYAGFREHIKSKATLAETFMKNLNRNNNN-----NNSSNNYNH-----LGGSNGSLNLTEADSNS 632
                         |...|..|.|.:::||     ||:...:|.     .|..|..|:|.:.:..:
  Fly   251 -------------TSPATRRKRLRKSSNNGSGDRNNAEEQHNSSLDAGSGAGNAGLSLAQMNQMT 302

  Fly   633 FAILQANSKKMLDSARKQHKYLAKRKILMHYNTELGGEKRLKE---MERDRYPSAEQHDDALNNN 694
            |.                    |...:..|   .|...|.|||   .|.::.|    .|..|::.
  Fly   303 FG--------------------AGGGLAGH---SLHAAKLLKESASAELEQQP----QDSDLDDG 340

  Fly   695 HSHAQDNIMEPIITTIVPQTPPPSTHNNNFKIRLVESHHLTNNSNNNQNQSSNNNN--------S 751
            |.|....|...:....|.||.|.......     ..|.|...||.::.::.|..:.        .
  Fly   341 HGHLHMQIKPEVDIGGVNQTMPLDISGGT-----TPSEHDAPNSQSSHSEPSPAHAPHPPHPPLG 400

  Fly   752 SSSPQSNDCNNDEEALNLVQIPNANGSRNREATPTCATPTPDIQLIKREVKTELSP-----AENL 811
            ::|..|....:.|.:.::      .|..:.|..|.....:|.:...||.......|     ::::
  Fly   401 AASSSSGGSGSFERSFSI------GGVGSVECDPDGTPSSPAVMGTKRNRVLTRQPRVKRDSDSI 459

  Fly   812 SNNNGHDDEMAGAGFDRKYDDNNNNSGLDMETDSNNNNSKPGGDNNNGLALALGKHKLLSA---I 873
            |:.|....:.|....|   .|..|.:|....|  ..:.|..|..:.:..:.....|.||:.   |
  Fly   460 SSTNQISPDTAATTLD---FDPFNAAGATSAT--ARDYSTTGSHHLHHQSAVHHHHHLLTVPPRI 519

  Fly   874 NRNIEQDHP 882
            .|:..:..|
  Fly   520 ERHASEPAP 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:463994
BTB_POZ_BAB-like 418..500 CDD:349624 43/81 (53%)
BtbVIINP_647774.2 BTB_POZ_BAB-like 30..113 CDD:349624 43/82 (52%)
Blue background indicates that the domain is not in the aligned region.

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