DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trs33 and TRAPPC6A

DIOPT Version :10

Sequence 1:NP_650450.1 Gene:Trs33 / 41866 FlyBaseID:FBgn0266722 Length:152 Species:Drosophila melanogaster
Sequence 2:NP_077013.1 Gene:TRAPPC6A / 79090 HGNCID:23069 Length:173 Species:Homo sapiens


Alignment Length:173 Identity:71/173 - (41%)
Similarity:106/173 - (61%) Gaps:21/173 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEEILFDCLHAEIVN--YCLD-------------------SNKEHDLATLEYIGFTTGYRLIER 44
            |::.:||:.||.|:|.  :..|                   ..::..|:.||.:||..|..|.||
Human     1 MADTVLFEFLHTEMVAELWAHDPDPGPGVSAGLRGEEAGATKGQKMSLSVLEGMGFRVGQALGER 65

  Fly    45 LTREVSRFKDELETMKFICTDFWMLIYKKQVDNLRTNNHGMYVVQDKAFRFLTRISPGTKQLEHA 109
            |.||...|::||:.:||:|.|.|:.:::||:|:||||:.|.||:||.:|..|..::.|.:.||.|
Human    66 LPRETLAFREELDVLKFLCKDLWVAVFQKQMDSLRTNHQGTYVLQDNSFPLLLPMASGLQYLEEA 130

  Fly   110 PKFVAFTCGLVRGALSNLGINSTVTAEVQSIPACKFHIEVNRN 152
            |||:||||||:||||..|||.|.|||.|.::|.|||.:.:.::
Human   131 PKFLAFTCGLLRGALYTLGIESVVTASVAALPVCKFQVVIPKS 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs33NP_650450.1 TRAPPC6A_Trs33 4..150 CDD:271347 70/166 (42%)
TRAPPC6ANP_077013.1 TRAPPC6A_Trs33 3..171 CDD:271347 70/167 (42%)

Return to query results.
Submit another query.