DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trs33 and Trappc6a

DIOPT Version :10

Sequence 1:NP_650450.1 Gene:Trs33 / 41866 FlyBaseID:FBgn0266722 Length:152 Species:Drosophila melanogaster
Sequence 2:XP_063129728.1 Gene:Trappc6a / 680465 RGDID:1591735 Length:203 Species:Rattus norvegicus


Alignment Length:168 Identity:57/168 - (33%)
Similarity:85/168 - (50%) Gaps:17/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEEILFDCLHAEIVN--YCLD-----SNKEHDLATLEYIGFTTGYRLIERLTREVSRFKDELET 58
            |::.:||:.||.|:|.  :..|     ..|:..|:.||.:||..|..|.|||.||....::||:.
  Rat    16 MADAVLFEFLHTEMVAELWAPDPDPGSGGKKKSLSVLEGLGFRVGQALGERLPRETLAVREELDA 80

  Fly    59 MKFICTDFWMLIYKKQVDNLRTNNHGMYVVQDKAFRFLTRISPGTKQLEHAPKFVAFT------- 116
            :||:|.|.|..:::|.:|.||||:.|.||:||.:|..|..:..|.:.||.|||.:..|       
  Rat    81 LKFLCKDLWAAMFQKHMDGLRTNHQGTYVLQDNSFPLLIPMGSGPQYLEEAPKVLGETGYDHLPT 145

  Fly   117 -CGLV--RGALSNLGINSTVTAEVQSIPACKFHIEVNR 151
             .||.  .|..|.|..:|.::.....:|.......|.|
  Rat   146 PLGLSWGWGLASPLPTHSVLSPTPTPVPGLHLRPPVRR 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trs33NP_650450.1 TRAPPC6A_Trs33 4..150 CDD:271347 54/162 (33%)
Trappc6aXP_063129728.1 None

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