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Protein Alignment SerRS-m and SES1

DIOPT Version :9

Sequence 1:	NP_524365.1	Gene:	SerRS-m / 41862	FlyBaseID:	FBgn0021750	Length:	417	Species:	Drosophila melanogaster
Sequence 2:	NP_010306.1	Gene:	SES1 / 851587	SGDID:	S000002430	Length:	462	Species:	Saccharomyces cerevisiae

Alignment Length:	427	Identity:	120/427 - (28%)
Similarity:	203/427 - (47%)	Gaps:	44/427 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    12 PLLLLRRQRSHDAKA-----VEAPIHRPVPTSAQLDELERNV------VVRHHKNNVPLIRSLIQ 65
            |.|:.:.|::.:|..     :.:.....|.|..:||||.:..      :....||.......|.:
Yeast    15 PELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQKDIGLKFKNKEDASGLLAE 79

  Fly    66 ---------ELDAGDQHKLRQLQAELEQLPNATHPRL---RDYGEEPRELAQYVHRQ-------- 110
                     ||...:|.:.:.|:.::.|:.|..||.:   .|  ||..||.:....:
Yeast    80 KEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVSND--EENNELVRTWKPEDLEAVGPI 142

  Fly   111 --LTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLI 173
              :|.:.......|:...|:.|..|......||:.|:.......|.||:|.|.||.:...|:..:
Yeast   143 ASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAKGYIPL 207

  Fly   174 SVPDILPKEVIESCGMRTEGERTQVYKLDTGE---CLSGTSEMALAGFFANKLLS--EDQLPLKV 233
            ..|.::.||::......:|.:. ::||:..||   .|..|||..::.:.:.:...  ::|||:..
Yeast   208 QAPVMMNKELMSKTAQLSEFDE-ELYKVIDGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHY 271

  Fly   234 TAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRL 297
            ...|.|:|.|. |..::..|::|||.|.|:|.|.|...|:|..|.|:..:...:.::.|.|.:|:
Yeast   272 VGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRI 336

  Fly   298 LDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIR--YRRSADGQILHAHTI 360
            :.:...||...|.:|||:|||.|.::.:.|:.|||||||||:|.|.||  .::..|.:..:.|.:
Yeast   337 VGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCL 401

  Fly   361 NGTATAIPRLLIALLESYQKEDGIEIPAVLRPFMDNQ 397
            |.|..|..|.|..:||:||.|||:.:|.|||.::..:
Yeast   402 NSTLAATQRALCCILENYQTEDGLVVPEVLRKYIPGE 438

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
SerRS-m	NP_524365.1	class_II_aaRS-like_core	100..394	CDD:444800	96/311 (31%)
SES1	NP_010306.1	PLN02678	1..449	CDD:215364	120/427 (28%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-
Hieranoid	0	0.000	Not matched by this tool.