DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and SES1

DIOPT Version :9

Sequence 1:NP_001262599.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_010306.1 Gene:SES1 / 851587 SGDID:S000002430 Length:462 Species:Saccharomyces cerevisiae


Alignment Length:427 Identity:120/427 - (28%)
Similarity:203/427 - (47%) Gaps:44/427 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PLLLLRRQRSHDAKA-----VEAPIHRPVPTSAQLDELERNV------VVRHHKNNVPLIRSLIQ 65
            |.|:.:.|::.:|..     :.:.....|.|..:||||.:..      :....||.......|.:
Yeast    15 PELIRQSQKARNASVEIVDEIISDYKDWVKTRFELDELNKKFNKLQKDIGLKFKNKEDASGLLAE 79

  Fly    66 ---------ELDAGDQHKLRQLQAELEQLPNATHPRL---RDYGEEPRELAQYVHRQ-------- 110
                     ||...:|.:.:.|:.::.|:.|..||.:   .|  ||..||.:....:        
Yeast    80 KEKLTQQKKELTEKEQQEDKDLKKKVFQVGNIVHPSVVVSND--EENNELVRTWKPEDLEAVGPI 142

  Fly   111 --LTPQSRLKEFSELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLI 173
              :|.:.......|:...|:.|..|......||:.|:.......|.||:|.|.||.:...|:..:
Yeast   143 ASVTGKPASLSHHEILLRLDGYDPDRGVKICGHRGYFFRNYGVFLNQALINYGLQFLAAKGYIPL 207

  Fly   174 SVPDILPKEVIESCGMRTEGERTQVYKLDTGE---CLSGTSEMALAGFFANKLLS--EDQLPLKV 233
            ..|.::.||::......:|.:. ::||:..||   .|..|||..::.:.:.:...  ::|||:..
Yeast   208 QAPVMMNKELMSKTAQLSEFDE-ELYKVIDGEDEKYLIATSEQPISAYHSGEWFEKPQEQLPIHY 271

  Fly   234 TAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRL 297
            ...|.|:|.|. |..::..|::|||.|.|:|.|.|...|:|..|.|:..:...:.::.|.|.:|:
Yeast   272 VGYSSCFRREAGSHGKDAWGVFRVHAFEKIEQFVITEPEKSWEEFEKMISYSEEFYKSLKLPYRI 336

  Fly   298 LDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIR--YRRSADGQILHAHTI 360
            :.:...||...|.:|||:|||.|.::.:.|:.|||||||||:|.|.||  .::..|.:..:.|.:
Yeast   337 VGIVSGELNNAAAKKYDLEAWFPYQKEYKELVSCSNCTDYQSRNLEIRCGIKKMGDREKKYVHCL 401

  Fly   361 NGTATAIPRLLIALLESYQKEDGIEIPAVLRPFMDNQ 397
            |.|..|..|.|..:||:||.|||:.:|.|||.::..:
Yeast   402 NSTLAATQRALCCILENYQTEDGLVVPEVLRKYIPGE 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_001262599.1 SerS 60..404 CDD:223250 108/368 (29%)
class_II_aaRS-like_core 100..394 CDD:294192 96/311 (31%)
SES1NP_010306.1 PLN02678 1..449 CDD:215364 120/427 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S479
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100275
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.660

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