DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and sars1

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_001003882.1 Gene:sars1 / 445405 ZFINID:ZDB-GENE-040831-1 Length:515 Species:Danio rerio


Alignment Length:410 Identity:123/410 - (30%)
Similarity:208/410 - (50%) Gaps:45/410 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VPTSAQ-LDELERNVVVRHHKNNVPLIRSLIQE-LDAGDQHKLRQLQAE----LEQLPNATHPRL 93
            :|..|| |:.|....:.......:..:|.|:.| :...|..:|: |:||    |.::.|..||.:
Zfish    80 LPEEAQNLEALTAETLSPLTVTQIKKVRVLVDEAVQKTDSDRLK-LEAERFEYLREIGNLLHPSV 143

  Fly    94 RDYGEEPRELAQYVHRQLTPQSRLKEFS--ELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQA 156
            ....:|..:  ..|.|.....:..|::|  :|...::.|..:......|.:.|:|.|.|..||||
Zfish   144 PISNDEDAD--NKVERTWGDCTVQKKYSHVDLVVMVDGYEGEKGAIVAGSRGYFLKGPLVFLEQA 206

  Fly   157 IIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKL--------DTG----ECLSG 209
            :|.|||:.:....:.|:..|..:.|||::.....::.:. ::||:        |..    :.|..
Zfish   207 LINYALRILYSKNYNLLYTPFFMRKEVMQEVAQLSQFDE-ELYKVIGKGSEKSDDNTVDEKYLIA 270

  Fly   210 TSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFAICT--EE 271
            |||..:|.|..::.|..::||::...:|.|:|.|. |..::.:||:|||||.|:|.|...:  :.
Zfish   271 TSEQPIAAFLRDEWLKPEELPIRYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDG 335

  Fly   272 QSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTD 336
            :|....:|........::.||:.:|::::....|...|.:|.|:|||.||.|.:.|:.|||||||
Zfish   336 KSWEMFDEMIGTAESFYQTLGIPYRIVNIVSGALNHAASKKLDLEAWFPGSQAFRELVSCSNCTD 400

  Fly   337 YQARRLGIRY---RRSADGQILHAHTINGTATAIPRLLIALLESYQKEDGIEIPAVLRPFMDNQE 398
            ||||||.|||   ::..| :....|.:|.|..|..|::.|:||::|.|:||.:|..|:.||    
Zfish   401 YQARRLRIRYGQTKKMMD-KAEFVHMLNATMCATTRVICAILENFQTEEGIIVPEPLKAFM---- 460

  Fly   399 LITRNKRIPE--TKLVKFIK 416
                    |.  |:::||:|
Zfish   461 --------PPGLTEIIKFVK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 98/313 (31%)
sars1NP_001003882.1 PLN02678 3..475 CDD:215364 123/410 (30%)
Interaction with tRNA. /evidence=ECO:0000250|UniProtKB:P49591 9..61
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..515
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P49591 482..494
Blue background indicates that the domain is not in the aligned region.

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