DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SerRS-m and sars2

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_073778986.1 Gene:sars2 / 394154 ZFINID:ZDB-GENE-040426-1616 Length:536 Species:Danio rerio


Alignment Length:433 Identity:159/433 - (36%)
Similarity:246/433 - (56%) Gaps:36/433 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LPTNSQLWRPLLLLRRQRSH---DAKAVEAPIHRPV-----PTSAQLDEL----ERNVVVRHHKN 55
            :|....:|:.|..::.:.||   ..:.|.:.:...|     .|.:.|:|.    |....:|...|
Zfish   112 VPLIISVWKNLQKVQEEISHLEGRKQVVSSTVRELVGKHDKSTLSSLEEYGHAREEGRAIREKLN 176

  Fly    56 NVPLIRSLIQELDAGDQHKLRQLQAELEQLPNATHPRLRDYGEEPRELAQYVHRQLTPQSRLKEF 120
            .:     .:||.:...:|..|.|     :|||.|||.:....|....:.:.|..:.....:.|..
Zfish   177 QL-----YLQEKELEKEHYCRAL-----RLPNRTHPSVPIGDESQARVVEVVGEKREFDFKPKGH 231

  Fly   121 SELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIE 185
            .::..:|::.|...|.:.:||:||||.|..|.|:.|:..:|:..:.:.||..:.|||||...|.|
Zfish   232 LQIGESLDIIRQRRLSHVSGHRSYYLRGAGAQLQFALQNFAMDLLQKRGFIPMVVPDILKSVVFE 296

  Fly   186 SCGMRTEGERTQVYKLDTGEC----LSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSG 246
            .|||:...:::|||.|:....    |:||.|:.:||:|.:..::...||::....|.||||||..
Zfish   297 GCGMQPHAQKSQVYSLNPKRSPDLNLAGTGEVGVAGYFMDHAVNFKDLPVRTVCSSTCYRAETDT 361

  Fly   247 LQEEKGIYRVHQFNKVEMFAIC---TEEQSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAP 308
            .:|..|:||||.|.|:|||.:.   |.|:|...|::|..::.::|..|.|::|:||||..|||.|
Zfish   362 GRETWGLYRVHHFTKIEMFGVSANETGEESSQLLDQFVTLQKEIFSSLQLHYRVLDMPTQELGPP 426

  Fly   309 AYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILHAHTINGTATAIPRLLIA 373
            ||:|:|||||||||..:|||||.|||||||:|||.||| ...||::.:|||:|.||.||||.:||
Zfish   427 AYRKFDIEAWMPGRGSFGEISSASNCTDYQSRRLDIRY-EGEDGKLQYAHTVNATACAIPRTIIA 490

  Fly   374 LLESYQKEDG-IEIPAVLRPFMDNQELITRNKRIPETKLVKFI 415
            :||:||.:.| :::|.||:.:: ..|:|.:.|..|    :|:|
Zfish   491 ILETYQTKKGTVQVPEVLQQYI-GMEVIEKPKYTP----IKYI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 128/301 (43%)
sars2XP_073778986.1 None

Return to query results.
Submit another query.