DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and Sars1

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_006233198.1 Gene:Sars1 / 266975 RGDID:628813 Length:536 Species:Rattus norvegicus


Alignment Length:416 Identity:122/416 - (29%)
Similarity:200/416 - (48%) Gaps:54/416 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DELERNVVVRHHKNNVPLIRSL----IQELDAGDQHKLRQLQAE-LEQLPNATHPRLRDYGEEPR 101
            |:|..:.:.....:.:..:|.|    ||:.| |::.||...:.| |.::.|..||.:....:|..
  Rat    88 DDLTADTLAALKVSQIKKVRLLVDEAIQKCD-GERVKLEAERFENLREIGNLLHPSVPISNDEDA 151

  Fly   102 ELAQYVHRQLTPQSRLKEFS--ELARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQA 164
            :  ..|.|.....:..|::|  :|...::.:..:......|.:.|:|.|.|..||||:|||||:.
  Rat   152 D--NKVERIWGDCTVRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRT 214

  Fly   165 VTEHGFKLISVPDILPKEVIESCGMRTEGERTQVYKL---------DTG---ECLSGTSEMALAG 217
            :...|:..|..|..:.|||::.....::.:. ::||:         |:.   :.|..|||..:|.
  Rat   215 LGSRGYTPIYTPFFMRKEVMQEVAQLSQFDE-ELYKVIGKGSEKSDDSSYDEKYLIATSEQPIAA 278

  Fly   218 FFANKLLSEDQLPLKVTAVSRCYRAET-SGLQEEKGIYRVHQFNKVEMFAICT--EEQSEAELEE 279
            ...::.|..:.||:|....|.|:|.|. |..::.:||:|||||.|:|.|...:  :.:|....:|
  Rat   279 LHRDEWLRPEDLPIKYAGFSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFDE 343

  Fly   280 FKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGI 344
            ......:.::.||:.:.::::....|...|.:|.|:|||.||...:.|:.|||||||||||||.|
  Rat   344 MITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRI 408

  Fly   345 RYRRS--------------------------ADGQILHAHTINGTATAIPRLLIALLESYQKEDG 383
            ||.::                          :..::...|.:|.|..|..|.:.|:||:||.|.|
  Rat   409 RYGQTKKMMDKRKNNLRFSTQNKLEAVSSLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKG 473

  Fly   384 IEIPAVLRPFMDN--QELITRNKRIP 407
            |.:|..||.||..  ||||...|..|
  Rat   474 IVVPEKLREFMPPGLQELIPFVKPAP 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 98/336 (29%)
Sars1XP_006233198.1 PLN02678 3..510 CDD:215364 122/416 (29%)

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