DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and srs1

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_594867.1 Gene:srs1 / 2542163 PomBaseID:SPAC29A4.15 Length:450 Species:Schizosaccharomyces pombe


Alignment Length:428 Identity:120/428 - (28%)
Similarity:203/428 - (47%) Gaps:40/428 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QLWRPLLLLRRQRSHDAKA---VEAPIHRPVPTSAQLDEL--ERNVVVRHHKNNVPLIRSLIQEL 67
            ::::..:.||.:..:..|:   |:..|...:.......||  |:|.:....||       ||::.
pombe    37 EMYKEWVSLRFELDNTNKSINRVQKEIGLKMKAKEDASELLEEKNSLTERKKN-------LIEQE 94

  Fly    68 DAGDQHKLRQLQAELEQLPNATH---PRLRDYGEEPRELAQYVHRQLTPQSRLKE------FSEL 123
            .|    |.:::...:..:.|..|   |...|  |:..|:.    |:..|:....|      ..|:
pombe    95 TA----KNKEMLNVVSSIGNIVHDSVPVSMD--EDNNEII----RKWAPEGVTVEKKNCLSHHEV 149

  Fly   124 ARALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCG 188
            ...|:.|..:.....:||:.|:|.........|:|||.|..:.:.|:..:..|.:|.|:|:....
pombe   150 LTRLDGYDPERGVKVSGHRGYFLRQYGVFFNLALIQYGLDFLEKRGYIALQAPTMLNKDVMAKTA 214

  Fly   189 MRTEGERTQVYKLDTGE---CLSGTSEMALAGFFANKLLSE--DQLPLKVTAVSRCYRAET-SGL 247
            ...:.:. ::||:..|:   .|..|||..::.:.:.:...:  :|||||....|.|||.|. |..
pombe   215 QLEQFDE-ELYKVIDGDEERYLIATSEQPISAYHSGEWFEKPSEQLPLKYAGYSTCYRREAGSHG 278

  Fly   248 QEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQK 312
            ::..||:|||.|.|:|.|.:...|:|.....|..|...|.::.|.|.:|::.:....|...|.:|
pombe   279 RDAWGIFRVHAFEKIEQFVLTDPEKSWEAFTEMINHAEDFYKSLELPYRIVAIVSGALNNAAAKK 343

  Fly   313 YDIEAWMPGRQMWGEISSCSNCTDYQARRLGIR--YRRSADGQILHAHTINGTATAIPRLLIALL 375
            ||:|||.|.:..:.|:.|||||||||:|.|.||  .::..|.:..:.|.:|.|..|..|.|..:|
pombe   344 YDLEAWFPFQGEYKELVSCSNCTDYQSRNLEIRCGVKKMGDREKKYVHCLNSTLCATERALCCIL 408

  Fly   376 ESYQKEDGIEIPAVLRPFMDNQELITRNKRIPETKLVK 413
            |:||..||:.:|.||:|:|..:..:...|.:|:....|
pombe   409 ENYQTPDGVNVPKVLQPYMGGKTFLPFTKELPKNSTSK 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 96/307 (31%)
srs1NP_594867.1 PLN02678 1..450 CDD:215364 120/428 (28%)

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