DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and dia4

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:NP_594466.2 Gene:dia4 / 2541567 PomBaseID:SPAC25B8.06C Length:479 Species:Schizosaccharomyces pombe


Alignment Length:424 Identity:143/424 - (33%)
Similarity:214/424 - (50%) Gaps:74/424 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 DELERNVVVRHHK---NNVPLIRSLIQE-------------------------LDAGDQHKL--- 75
            :.::||.:.|:.:   ..||.|||||.|                         .|..::.||   
pombe    60 EAVQRNCINRNLQAIAETVPKIRSLIDEKESLKNEFFPLLSLKKEITLQIERCSDPNERGKLVNE 124

  Fly    76 -RQLQAELEQ------------------LPNATHPRLRDYGEEPRELAQYVHRQLTPQS-RLKEF 120
             :.|:.:.|:                  :||.|.|.:....|:...:.|.:...|..:: .||:.
pombe   125 AKGLKKKTEEYNKIISKVTNDLYQYCLAVPNTTLPTVPVGPEDKAVVVQKIGSPLVKKTGSLKDH 189

  Fly   121 SELA-RALNLYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVI 184
            .::| ..:||   :.....:||...|.||.:|.||.||..||:......|:..:..|.|:..::.
pombe   190 LQIANEGINL---EDAAQASGHSFCYTTGDIALLEMAITNYAMDFAISKGWCPVIPPTIVRTDIA 251

  Fly   185 ESCGMRTEGER-TQVYKLDT---------GECLSGTSEMALA--GFFANKLLSEDQLPLKVTAVS 237
            .:||.:...|. .|:|:||:         .:||.||:|::||  ||   |....:....||..||
pombe   252 LACGFQPRDEEGQQIYELDSYTSPLVSSPKQCLIGTAEISLAALGF---KKTFNNFTERKVVGVS 313

  Fly   238 RCYRAETSGL-QEEKGIYRVHQFNKVEMFAICTEEQSEAELEEFKNIEVDLFRRLGLNFRLLDMP 301
            |.||.|.... :|.:|:||:|:|.|||:||.....:|.....|..|.:.:....|.:..|:|:||
pombe   314 RAYRREAGARGKENRGLYRLHEFTKVELFAWTHPSRSSEMFNEIVNFQKEFVETLKIPARILNMP 378

  Fly   302 PCELGAPAYQKYDIEAWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILHAHTINGTATA 366
            ..|||:.|.||||||||||.||.:|||:|.|||.:||||||..|||...|...:  ||:||||.|
pombe   379 TAELGSSASQKYDIEAWMPARQSYGEITSASNCLEYQARRLLTRYRNDKDSGFV--HTLNGTAAA 441

  Fly   367 IPRLLIALLESYQKEDG-IEIPAVLRPFMDNQEL 399
            ||||:||:||::|:||| :::|..|.|::..:.|
pombe   442 IPRLIIAILENHQQEDGTVKVPETLVPYIHKEYL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 121/309 (39%)
dia4NP_594466.2 Seryl_tRNA_N 50..156 CDD:426757 17/95 (18%)
SerRS_core 169..470 CDD:238393 121/308 (39%)

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