DRSC/TRiP Functional Genomics Resources

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Protein Alignment SerRS-m and sars2

DIOPT Version :10

Sequence 1:NP_524365.1 Gene:SerRS-m / 41862 FlyBaseID:FBgn0021750 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_002940400.1 Gene:sars2 / 100485850 XenbaseID:XB-GENE-969286 Length:505 Species:Xenopus tropicalis


Alignment Length:417 Identity:166/417 - (39%)
Similarity:242/417 - (58%) Gaps:49/417 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LRRQRSHDAKAVEAPIHRPVPTSAQ-LDELERNVVVRHHKNNVPL-IRSLIQELDAGDQHKLRQL 78
            |..::|..||.|:   |..:....| |....|..::|....::.| :.:|.:|            
 Frog    97 LEEEKSAIAKEVK---HMVISEEKQNLQTNPRYALIRKRGKDIRLELSTLYKE------------ 146

  Fly    79 QAELE--------QLPNATHPRLRDYGEEPRELAQYVHRQLTPQSRLKEFS-------ELARALN 128
            ::.||        :|||.|||. ...|:|.:.      |.|.......||.       |:...|:
 Frog   147 ESNLEGSFYPRALRLPNRTHPN-TPVGDESKA------RVLEVVGVKPEFDFKICGHLEIGEDLD 204

  Fly   129 LYRMDHLGNYTGHKSYYLTGQLATLEQAIIQYALQAVTEHGFKLISVPDILPKEVIESCGMRTEG 193
            :.|...|.:.:||:||||.|..:.|:.|::.:.:..:.:.||..:||||:|...|.|.|||:.:.
 Frog   205 IIRQRRLSHVSGHRSYYLRGAGSLLQHALVNFTISKLVKKGFIPMSVPDMLRGAVFEGCGMQADA 269

  Fly   194 ERTQVYKLDTGE----CLSGTSEMALAGFFANKLLSEDQLPLKVTAVSRCYRAETSGLQEEKGIY 254
            ..:|||.:|..:    .|:||||:.:||||.:..:....||::....|.||||||...:|..|:|
 Frog   270 HASQVYSVDPLQHPDLNLAGTSEVGIAGFFMDHAVMLQDLPVRTVCCSTCYRAETDTGRETWGLY 334

  Fly   255 RVHQFNKVEMFAICTEE---QSEAELEEFKNIEVDLFRRLGLNFRLLDMPPCELGAPAYQKYDIE 316
            |||.|.|||||.:...|   :|:..|:||..::.::|..|||:|::|:||..|||.|||:|||||
 Frog   335 RVHHFTKVEMFGVTANESGIESQEMLDEFLGLQKEIFSELGLHFKVLEMPTQELGLPAYRKYDIE 399

  Fly   317 AWMPGRQMWGEISSCSNCTDYQARRLGIRYRRSADGQILHAHTINGTATAIPRLLIALLESYQKE 381
            ||||||..:|||||.|||||||:|||.|.|:|. ||::.||||:||||.|:||||||:|||.|::
 Frog   400 AWMPGRGKYGEISSTSNCTDYQSRRLNIMYQRQ-DGELRHAHTVNGTACAVPRLLIAILESNQRK 463

  Fly   382 DG-IEIPAVLRPFMDNQELITRNKRIP 407
            || :.||.||:|:| ..::|.:.:.||
 Frog   464 DGAVLIPEVLQPYM-GTDVIEKPRYIP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerRS-mNP_524365.1 class_II_aaRS-like_core 100..394 CDD:444800 139/308 (45%)
sars2XP_002940400.1 SerRS_core 177..477 CDD:238393 139/306 (45%)

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