DRSC/TRiP Functional Genomics Resources

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Protein Alignment: mRpL9 and RPL9

Sequence 1:NP_524363.3 Gene:mRpL9 FlyBaseID:FBgn0038319 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_190075.1 Gene:RPL9 AraportID:AT3G44890 Length:197 Species:Arabidopsis thaliana

Alignment Length:177 Identity:45/178 (25%)
Similarity:74/178 (42%) Gaps:33/178 (19%)


  Fly    46 RMRAKNFIYELVDDTLVKKRPNIEVVLKTFVEGVGDKGDVVSMKPHFVYNKLLLPGLAAYNTP-- 108
            ::..:.|.:|:|.....||..  :|:||..|..:|.:|.::.:|..|..|.||..|.|...||  
plant    30 KVSERRFNFEVVSQKKAKKLR--KVILKEDVTDLGKQGQLLDVKAGFFRNFLLPTGKAQLMTPLL 92

  Fly   109 --ENVAKYAKTEAEKSTVKHSSPYAQRTVNMLETI--------------VLAVVMNKDEPWVLEP 157
              |...:..:.||||..||..   ||:...:.:|:              :...|..:|...:   
plant    93 LKELKMEDERIEAEKQRVKEE---AQQLAMVFQTVGAFKVKRKGGKGKLIFGSVTAQDLVDI--- 151

  Fly   158 WHIKASLRKTGFYCREECITLPKERIEGPDLK--KENKDFYCTVTIN 202
              ||:.|:|.   ..:..::||:.|..|..:.  |.:.|....|.||
plant   152 --IKSQLQKD---IDKRLVSLPEIRETGEYIAELKLHPDVTARVKIN 193

Known Domains:


GeneSequenceDomainRegion External IDIdentity
mRpL9NP_524363.3 Ribosomal_L9_N 69..114 CDD:279605 16/49 (33%)
RPL9NP_190075.1 rplI 51..194 CDD:234659 40/155 (26%)
Ribosomal_L9_N 51..96 CDD:279605 16/45 (36%)
Ribosomal_L9_C <139..194 CDD:281881 15/64 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 LDO PTHR21368
Phylome 00.000 Not matched by this tool.
11.100

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