DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6276 and CG4404

DIOPT Version :10

Sequence 1:NP_650445.3 Gene:CG6276 / 41855 FlyBaseID:FBgn0038316 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:472 Identity:90/472 - (19%)
Similarity:144/472 - (30%) Gaps:211/472 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EEVF--KLIEIVQRDEAIYNPRHKYYFCRPYVENFWREVDLKLEKNPGASLAKWTNLRISF---- 86
            :.||  :.::.|:....::|..|..|..:..|:..|::|...::........:|..:|.||    
  Fly    11 DPVFNVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRERWRTIRSSFLRSL 75

  Fly    87 ----------RREY--TNYLEEKVPPCWSYFDRMFFLHPYLRKK--HQQPKSLDTQVQDALAHLS 137
                      :|:|  :.||:              ||.|:.:.:  |:|                
  Fly    76 KLARTQTGRGKRKYYLSKYLQ--------------FLVPFTKSRSCHKQ---------------- 110

  Fly   138 NLSSRMQRERSVTIPGSSSIGGQPTPSAHQSPPAQQLDNYLDYFDEAEHNNSELD---DIMEEEQ 199
             |...:.|:     ||             |:..|||.|..:...:||:.::.|:.   .:.|||.
  Fly   111 -LPGMVLRK-----PG-------------QAATAQQEDEVVAAEEEAKVSDGEMPLDVQVSEEEH 156

  Fly   200 QRNSRYHGQLDGNDIKSECEEPVDDYEQEAHEPEEDEQDDQD--------LHKMAPTSSSSSAEA 256
            :||                                .|||.:.        ||.:.....||:|..
  Fly   157 RRN--------------------------------QEQDREQPTACLPLRLHSIKVEHDSSNANQ 189

  Fly   257 Q-RRYANQHSHASRMLPGRLQMRTYHDEMRGAIRPRSQELQAPTAAVAGVNYSAQPTAHPNISFV 320
            | .|..:|.|..|                            .|.||:..         |...|  
  Fly   190 QLERMVSQQSLVS----------------------------VPAAALGN---------HLGWS-- 215

  Fly   321 RPTFSKPVDLVSTTTHAGGGGGGGVPGTAGLSEAELPTPSTAAVATPMAPSSSVSASSSSSYLSQ 385
                    ||  |....|.|.|          ..:|.|.:|...:.|..|..:.||.|       
  Fly   216 --------DL--TQWFKGHGSG----------HHKLTTTTTTPTSPPPPPQPATSALS------- 253

  Fly   386 RHGHNHMHGGHPQVPPSALPLRLEANNASGGSVSNGGAELCDCKTDPDAMFLMSLLPDIQKLNGR 450
                  :..|.|                 ||    ||::     .|.|..||:||.|.|:::||:
  Fly   254 ------VFTGGP-----------------GG----GGSQ-----PDADYSFLISLHPYIKEMNGK 286

  Fly   451 DRGKIKIAFQNILQDYL 467
            ...|.:.....::.|.|
  Fly   287 QNRKFRQKVVGLIDDIL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6276NP_650445.3 MADF 32..116 CDD:214738 18/99 (18%)
BESS 431..465 CDD:460758 11/33 (33%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 18/99 (18%)
BESS 267..301 CDD:460758 11/33 (33%)

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