DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and Iws1

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_775617.1 Gene:Iws1 / 73473 MGIID:1920723 Length:766 Species:Mus musculus


Alignment Length:649 Identity:124/649 - (19%)
Similarity:226/649 - (34%) Gaps:179/649 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   544 NQSYRTKGELEAHINEVH--TDDNKQQCIYCNKVFEQELQLYRHMKS-----YHKEQALEDGIID 601
            :.|.....:.|..:.::|  ||....:....|....:..:|:|...|     .|.|....|...:
Mouse    47 HHSENETSDREDGLAKIHNGTDSENDEPSNANASDSESEELHRPKDSDSDSEEHAESPASDSENE 111

  Fly   602 ETDEEFLGSQDEEEEA----EGDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVEQ 662
            ..::.  ||..|.||.    ..|.|:|           ::|..|.|....:...|.|:.|.|.| 
Mouse   112 PVNQH--GSDSENEELLNGHASDSEKE-----------EVSKHAASDSEAEDTLQPQVSESDSE- 162

  Fly   663 VQQEVKFVGADGNEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHVKQE--TDEKSLA 725
                              |..|.:.....|::.....       :|:.|:|.:.:.  :|.:|..
Mouse   163 ------------------DPPRPQASDSENEEPPKPR-------ISDSESEELPKPRVSDSESED 202

  Fly   726 GTEEEYDDSQIYSELGAADSVESAKKNIADESKE--------SIDNLEWAENLIAESE-EQSNKE 781
            ....:..||         :|.|..|..::|...|        ..::.|..:..:::|| |...|.
Mouse   203 PPRPQASDS---------ESEELPKPRVSDSESEDPPRPQASDSESEELPKPRVSDSESEDPQKG 258

  Fly   782 PKSDKPRDDISEKLKELTGDWTEDENDDDVDDKPATAELASELANKDPEPTVH----EEEDDIDL 842
            |.||...:|.|...::      .|.:|.|.::|...:|:.:|.........:|    |||:....
Mouse   259 PASDSEAEDASRHKEK------PDSDDSDGENKREDSEVQNESDGHTDRKGLHSSDSEEEEPKRQ 317

  Fly   843 ALQSLHKGPEEATEEKASEESVTSADDAVDAVPNINSQPEKM-----DVDSEAADEKASKAEVQI 902
            .:.|.....:|..|||.::.......|:.|...|.:::..::     |.||:...:|:.|.|..:
Mouse   318 KIDSDDDEEKEGDEEKVAKRKAAVLSDSEDDAGNASAKKSRVVCDADDSDSDVVSDKSGKRETTV 382

  Fly   903 KKEAELENDQEEFI---KEDSPIPHSDS---------VAELREAVTASEGEDDVHLEADNIRKEL 955
            ..::|.|..:||..   |||..:..|||         :|::.......|.|:......:::.:|.
Mouse   383 ASDSEEEAGKEESSVKKKEDKDLFGSDSESGNEEENLIADIFGESGDEEEEEFTGFNQEDLEEEK 447

  Fly   956 LDELIAEAEKPDQEKDIVQSEE----NATTEALDRS----------------VTDEDDLVPPTQV 1000
            .:..:.|||..|.:.:|.:.:.    :.....|.|.                ::|.||:     |
Mouse   448 NETQLKEAEDSDSDDNIKRGKHMDFLSDFEMMLQRKKSMCGKRRRNRDGGTFISDADDV-----V 507

  Fly  1001 STEQMEIDEPAAEKAAENNE----------------DTRTADEKEAVEDK-------------PN 1036
            |...::::|.|.|....||:                ..:..|.||...|.             |:
Mouse   508 SAMIVKMNEAAEEDRQLNNQKKPALKKLTLLPTVVMHLKKQDLKETFIDSGVMSAIKEWLSPLPD 572

  Fly  1037 QT--------------QDVTTAEKPTLESAKAG----------DEATSGEAASVDKVKSLISEW 1076
            ::              |::.:..:.||:.:..|          .|:.|.:    |....||:||
Mouse   573 RSLPALKIREELLKILQELPSVSQETLKHSGIGRAVMYLYKHPKESRSNK----DMAGKLINEW 632

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561 11/56 (20%)
C2H2 Zn finger 540..568 CDD:275371 5/25 (20%)
C2H2 Zn finger 569..586 CDD:275371 3/16 (19%)
PTZ00121 <709..1075 CDD:173412 90/470 (19%)
Iws1NP_775617.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..466 96/472 (20%)
MSCRAMM_ClfA <66..428 CDD:468110 85/415 (20%)
Integrase domain-binding motif (IBM). /evidence=ECO:0000250|UniProtKB:Q96ST2 416..442 3/25 (12%)
Interaction with SUPT6H and ALYREF. /evidence=ECO:0000250 470..766 28/172 (16%)
TFIIS_I <475..739 CDD:469629 28/167 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 643..679
Blue background indicates that the domain is not in the aligned region.

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