DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cp190 and si:ch211-253b8.2

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001188489.1 Gene:si:ch211-253b8.2 / 562114 ZFINID:ZDB-GENE-030131-4633 Length:386 Species:Danio rerio


Alignment Length:341 Identity:61/341 - (17%)
Similarity:100/341 - (29%) Gaps:79/341 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 PQG--TQTQLEHGSTTIILKQDSPSQTPTIIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIKL 361
            |:|  ||..|....:.|.:|.:       :.....|||..:.:.|..|.....||..:  .|:..
Zfish    68 PEGEVTQAPLASDISEIRVKME-------VAAVPMSNASTSTSPISEEYKWCEPHHYQ--SNLPN 123

  Fly   362 KIMPNTPAAPTEKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQKAASSQQKSGTS 426
            .::.|......:..:..|||  :.||....:......|....|..|.....||........:.||
Zfish   124 VLLRNEENLGIDTQSSVTVK--SEQSDNQDNHSYSAAVEVCIDSQTEYPAPQQDPTPFPLYTETS 186

  Fly   427 QTTGNQGTGANP----------------------------------PANTAAAQKRRIDSKTMHA 457
            ..|..:..|...                                  .|.:.:..|.:|..|....
Zfish   187 NETRPKAGGQRQQNILFCRFCRRLFRTRGRLQKHLLVHKNDVYLWNSAPSGSRFKSKIHLKPQER 251

  Fly   458 LIAQGAENTTGPWLCLRCGVNGRPISIPSYRGFRRHLINTHKETID------------PALCEHC 510
            |..:....|.  |.....|..            |.|.::|::...|            |..|:.|
Zfish   252 LNTERQAETN--WTGQLAGSQ------------RSHHVDTNQRNSDKLSSSDQQHGNYPFYCKVC 302

  Fly   511 GWRSVNNRELHFHMYMEHQTKSLLYTFAECALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKV 575
            .......:.:..||.:....::.     .|..|.:.:.....|..|: .:||.:....|..|.|.
Zfish   303 DRPFRRQKSMQNHMLLHQDERNY-----ACQFCGRKFHKSWHLAEHL-RIHTGEKPFGCSECGKR 361

  Fly   576 FEQELQLYRHMKSYHK 591
            |.|..|...|:..:|:
Zfish   362 FVQWNQARSHIIKHHE 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620
COG5236 <471..>594 CDD:227561 24/133 (18%)
C2H2 Zn finger 540..568 CDD:275371 6/27 (22%)
C2H2 Zn finger 569..586 CDD:275371 6/16 (38%)
PTZ00121 <709..1075 CDD:173412
si:ch211-253b8.2NP_001188489.1 ZIP_TSC22D-like 1..54 CDD:424092
C2H2 Zn finger 299..319 CDD:275368 4/19 (21%)
COG5048 308..>379 CDD:227381 16/76 (21%)
C2H2 Zn finger 327..347 CDD:275368 4/20 (20%)
zf-H2C2_2 339..364 CDD:463886 8/25 (32%)
C2H2 Zn finger 355..375 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.