DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cp190 and Zbtb40

DIOPT Version :10

Sequence 1:NP_524359.2 Gene:Cp190 / 41848 FlyBaseID:FBgn0000283 Length:1096 Species:Drosophila melanogaster
Sequence 2:NP_001178800.1 Gene:Zbtb40 / 362635 RGDID:1309866 Length:1255 Species:Rattus norvegicus


Alignment Length:932 Identity:188/932 - (20%)
Similarity:302/932 - (32%) Gaps:290/932 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 PIVNFMYTGTLEF---------ELKMYGK---------LLRTAKEMNMTV--LLKLLEAHRRT-- 125
            |||.|:.|...||         ::...|:         |.|..:|..:..  |:|||:|.|..  
  Rat   358 PIVEFLETAKEEFLPDSEKRVIQICCEGRTPKETVENLLHRVTEEKTLPAKSLVKLLQAVRTAFP 422

  Fly   126 -----MENVNRQQRPPSPKGIRRRT-----VGQPSS-GLPQQRVLGPSPQSRNVATPIAQRANTQ 179
                 :||:.:....|...|:.|.|     ..:|.. .:|..||.|.||      .|.|..|...
  Rat   423 NLGLLLENLQKVAESPGTTGLTRATRETAWTEEPKRLCIPADRVDGSSP------NPDAYGAELL 481

  Fly   180 RGSTGNTMSRTSGGSNRSPYGDSSNVKQEPTSPFEQLRKGYNNNKRPAQTSLLSPPSKKPSLEEV 244
            |          ....|.|.....|.|..:..|..:.|..|    .|....:|:...|....:..:
  Rat   482 R----------KYHENLSEILIDSQVLLKVISRLKSLAPG----DREVMQTLVKQDSGSGGVSSL 532

  Fly   245 KEFA-EQQRM------RKQIAAEYGDNDP----------EYDGGMLYDDVHAGDDDDDDMPPQPS 292
            ...| |:|.:      :..:||:..:..|          |...|..:..|.|.:....:...:.|
  Rat   533 MSAALERQTVSAAAIWQLLLAAQETETCPLNLLLEEVEREPGAGAFFRAVTAPESTVLETILRHS 597

  Fly   293 TSKQQSPQGT------QTQLEHGSTTI--ILKQDSPSQTP---------TIIVKDSSNAKLNHTK 340
            ...:::.|.|      .::.||.:.|:  :|...|.:.:|         ..:.|..|.:.:.|  
  Rat   598 KLVREAIQQTVGREHLSSEEEHLAETVKEMLSISSETVSPEASLRVVLSRAMEKSVSASVVCH-- 660

  Fly   341 IIAEVLRQYP----------HI---VKGHKNIKLKIMPNT-PAA--PTEKSAPATVK-------- 381
            ::..|.|.:|          |:   .|.:...:.|:.... |.|  .||::|.|..:        
  Rat   661 LLCSVHRSFPGLQPLMQELAHVGFLTKENAEERWKVTDGLHPGAKDKTEEAAEAAREDGRAMEQK 725

  Fly   382 -------PPANQSSATTSPH--KKLHVSFKADKSTPLI-----------TAQQKAASSQQKSGTS 426
                   |...:...:.||.  ||..|....|||....           .|:.|.|..:..|.|.
  Rat   726 EQGPEPVPERQEKDTSASPDAAKKSFVCKACDKSFHFYCRLKVHMKRCRVAKSKQAQGKGDSDTR 790

  Fly   427 QTTGNQGTGANPPANTAAAQ-------KRRI--------------DSKTMHALI----------- 459
            .:....|. ..|.|.:|.|:       |:|:              .....|.|.           
  Rat   791 DSEKELGR-QQPEARSAGAEPDAPKKKKKRLPVTCDLCGREFAHASGMQYHKLTEHFDEKPFSCE 854

  Fly   460 ---AQGAENTT-----------GPWLCLRCGVNGRPISIPSYRGFRRHL---------------- 494
               |:.|.|:|           .|::|..|.:.....|..:|...::|.                
  Rat   855 ECGAKFAANSTLKNHLRLHTGDRPFMCKHCLMTFTQASALAYHTKKKHSEGKMYACQYCDAVFAQ 919

  Fly   495 -------INTHKETID-PALCEHC--GWRSVNNRELHFHMYMEHQTKSLLYTFAECALCNQSYRT 549
                   :.||  |.| |.:|..|  |:|..|...:|.|.:  |......|   :|..|..|:.|
  Rat   920 SIELSRHVRTH--TGDKPYVCRDCGKGFRQANGLSIHLHTF--HTDIEDPY---DCKKCRMSFST 977

  Fly   550 KGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGIIDETDEEFLGSQDEE 614
            ..:...||::||:.: ...|..|.|:|.....|.|||.::...:....||.::..::..|.....
  Rat   978 LQDHRKHIHDVHSKE-YHPCPTCGKIFSAPSMLERHMVTHVGGKPFSCGICNKAYQQLSGLWYHN 1041

  Fly   615 EEAEGDE-EQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDVE---------------QV 663
            .....|. ..:..::.|...|...|...|.:.|::..:..:.:..|::               .:
  Rat  1042 RTHHPDVFAAQNHRSPKFSSLQCSSCDKTFSNTIEHKKHIKTEHADLKFHECGQCKELFPTPALL 1106

  Fly   664 QQEVK-------------------FVGADGNEVELTDEQRK--------EILSQLNQQQA----- 696
            |..||                   |.||..:.|  |.|..|        |:..:|...||     
  Rat  1107 QVHVKCQHSGSQPFRCLYCAATFRFPGALQHHV--TTEHFKQSESTFPCELCGELFTSQAQLDGH 1169

  Fly   697 -------------GATAGGVVMVLSEPE----AEHVKQETDEKSLAGTE-----EEYDDSQIYSE 739
                         .|.|..:|.|:..||    ||.| ...:|..|||::     .:...||..||
  Rat  1170 LESEHPKVTGTETQAAASRMVQVIQAPEPAAPAEQV-ITLEETQLAGSQVFVTLPDPQTSQNSSE 1233

  Fly   740 LGAA---DSVESAKKNIADESK 758
            |.|.   |.::.....|..|:|
  Rat  1234 LVAVTVEDLLDGTVTLICGEAK 1255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cp190NP_524359.2 BTB_POZ_CP190-like 16..125 CDD:349620 17/61 (28%)
COG5236 <471..>594 CDD:227561 35/148 (24%)
C2H2 Zn finger 540..568 CDD:275371 8/27 (30%)
C2H2 Zn finger 569..586 CDD:275371 6/16 (38%)
PTZ00121 <709..1075 CDD:173412 19/62 (31%)
Zbtb40NP_001178800.1 BTB_POZ_ZBTB40 1..116 CDD:349534
C2H2 Zn finger 824..845 CDD:275368 2/20 (10%)
C2H2 Zn finger 853..873 CDD:275368 4/19 (21%)
COG5048 <869..1122 CDD:227381 49/260 (19%)
C2H2 Zn finger 881..930 CDD:275368 5/48 (10%)
C2H2 Zn finger 938..957 CDD:275368 6/18 (33%)
C2H2 Zn finger 968..986 CDD:275370 5/17 (29%)
C2H2 Zn finger 1024..1044 CDD:275368 3/19 (16%)
C2H2 Zn finger 1064..1083 CDD:275368 3/18 (17%)
C2H2 Zn finger 1093..1114 CDD:275368 3/20 (15%)
C2H2 Zn finger 1122..1141 CDD:275368 4/20 (20%)
C2H2 Zn finger 1153..1170 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.

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