DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG42404 and dgcr2

Sequence 1:NP_001247118.1 Gene:CG42404 FlyBaseID:FBgn0259823 Length:1133 Species:Drosophila melanogaster
Sequence 2:NP_001002656.1 Gene:dgcr2 ZFINID:ZDB-GENE-040718-404 Length:536 Species:Danio rerio

Alignment Length:209 Identity:62/210 (30%)
Similarity:88/210 (42%) Gaps:59/210 (28%)


  Fly    28 SCRDYNGKMYETGMHYMP-GPDSCRLCICDSGLPKACKMVLCEAFSKCKSFQTVGSGNNCCEVIC 91
            :|.|....:...|.::.| |.|.|..|.|..|.|:.|...|||....|:.|:.  ....||:..|
Zfish   266 TCVDIKDNVVNEGYYFTPKGDDPCLSCTCHDGEPEMCVAALCERPQGCQHFRK--DPKECCKFTC 328

  Fly    92 LDDQFSDGSTDF-----GIXLVASGITATLSLSLLFFLVNRLRQRKMRARENRQNAEDQRSIVGS 151
            ||   .|||:.|     |:.|:.|.|::.|.||||.|:|:|||||:      |:..|   :::| 
Zfish   329 LD---PDGSSLFDSMASGMRLIVSCISSFLILSLLLFMVHRLRQRR------RERIE---TLIG- 380

  Fly   152 IGYIAGNMGYMEGNLS----AIDY----------------SYSGAATHYPLWKP----------H 186
                 ||:.:.  ||.    ..||                ...|.|.|:....|          |
Zfish   381 -----GNLHHF--NLGRRVPGFDYRPDAFGTGLTPLHLSDDGEGGAFHFQEPPPPYAAYKYPDIH 438

  Fly   187 FPRGEAPPPYEEAV 200
            .| .:.|||||.::
Zfish   439 HP-DDPPPPYEASI 451

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG42404NP_001247118.1 VWC 32..89 CDD:214564 17/58 (29%)
dgcr2NP_001002656.1 LDLa 40..76 CDD:238060
CLECT_DGCR2_like 109..263 CDD:153069
VWC 267..325 CDD:214564 19/60 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR15256
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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