DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amt and rhcgl1

DIOPT Version :10

Sequence 1:NP_001097800.1 Gene:Amt / 41841 FlyBaseID:FBgn0038309 Length:562 Species:Drosophila melanogaster
Sequence 2:XP_068077859.1 Gene:rhcgl1 / 563826 ZFINID:ZDB-GENE-060209-2 Length:507 Species:Danio rerio


Alignment Length:439 Identity:93/439 - (21%)
Similarity:147/439 - (33%) Gaps:100/439 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NHSNYVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFT 75
            |...|..|...|:.|           :||   .|||.|          :..:.:.....|  ||.
Zfish    91 NDFYYRYPSFQDVHV-----------MIF---VGFGFL----------MTFLKRYSFGSV--GFN 129

  Fly    76 YWLFGYGM-----------SFGRGPLSNPFIAIGDFLLDPPVGDALMGQIFAAFLFQLSFATTAT 129
            :.:..:|:           ||.:..|.   |.||                 ...|....|.....
Zfish   130 FLIAAFGIQWALLMQGWFHSFDKEDLK---IKIG-----------------VENLINADFCVAGC 174

  Fly   130 TIVSGAMAERCNFKAYCLFSFLNTAVYCIPAGWVWGEHGFLNKLGAVDIAGSGPVHLIGGASAFA 194
            .|..||...:.:.....:.:.....:|.:.      |:..|..|...|..||..:|..|......
Zfish   175 LIAYGACLGKVSPVQLMVLTLFGVTLYAVE------EYIILYVLHVRDAGGSMVIHTFGAYYGLT 233

  Fly   195 -SAAMLGPRLGRYSEGYDPLPLGNPVNACMGLFVLWWGWLAFNSGSTYGVSGAKWQYAARAAVMT 258
             |..:..|.|.: |.........:.|.|.:|...||..|.:|||.......|..     |||:.|
Zfish   234 ISWVLYRPFLSQ-SNHLQRSVYHSDVFAMIGTLFLWMFWPSFNSAIADHGDGQH-----RAAINT 292

  Fly   259 MMGSFGGGFTS-SIYSFWRHGGGMDIMDLINGVL-GSLVSITAGCFLYRAWEALVI----GAIGS 317
            .:.......|: ::.|..:..|.:|::.:.|..| |.:...||..|:...:.:|::    |.:.:
Zfish   293 YLSLAASVLTTFALSSLSKKYGKLDMVHIQNATLAGGVAMGTASEFMITPYGSLIVGFCSGIVST 357

  Fly   318 LFCVLAMPLFDR-MGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGL-----FKG- 375
            |..|...||.:: :.:.|..|...:|.:.|:.|.|...:.|  ....::..|..||     |:| 
Zfish   358 LGYVFLTPLMEKTLKIQDTCGVHNLHAMPGVIGGIVGAVTA--ACASESVYGHEGLINMFGFEGK 420

  Fly   376 --------GGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDP 416
                    ||:...||....|..|....:....|.|       ||..||
Zfish   421 VNRTASVQGGYQAAGIFVAIAFGLVGGALVGGILKL-------PIWGDP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmtNP_001097800.1 AmtB 27..431 CDD:439775 88/423 (21%)
rhcgl1XP_068077859.1 Ammonium_transp 79..456 CDD:445985 88/424 (21%)

Return to query results.
Submit another query.