DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and hspa13

DIOPT Version :10

Sequence 1:NP_524356.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001017223.1 Gene:hspa13 / 549977 XenbaseID:XB-GENE-963595 Length:476 Species:Xenopus tropicalis


Alignment Length:426 Identity:168/426 - (39%)
Similarity:243/426 - (57%) Gaps:55/426 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFD 69
            :||||||||..||||.  .|:|.:|.::.|:::.||.|:||:.:..:|.........||..||:|
 Frog    34 IGIDLGTTYCSVGVFHPGTGEVRVITDENGHQSIPSIVSFTEKDVFVGYDGLELADANPQNTIYD 98

  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAY 134
            |||.||:.|....::.:...:.|:|::.:|.....|: .:|.....||.|||.:|.|:|:.||.|
 Frog    99 AKRFIGKIFTQEELEKESVRYQFKVLNRNGDVFFSVS-TNETFAVTPEYISSQLLLKLKKMAEDY 162

  Fly   135 LGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFD 199
            ||..|:.|||:|||.|::.||..|..|..:|||::||:||||||||:||||.|  |...|||:.|
 Frog   163 LGLPVSKAVISVPAEFDERQRNYTVKAANLAGLDILRVINEPTAAAMAYGLHK--VDVFNVLVVD 225

  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264
            |||||.|||:|:...|:|..::.||:..|||:||:.||:.:...:...:: ..:.:.|..:.|||
 Frog   226 LGGGTLDVSLLNKQGGMFLTRAMAGNNKLGGQDFNQRLLQYLYDKIYTRY-GSVPSQKEEIHRLR 289

  Fly   265 TACERAKRTL---SSS------TQASIEIDS----------LFEGT-----------DFYTS--- 296
            .|.|..|..|   :||      |.||...||          ..|.|           |.|:|   
 Frog   290 QAVEAIKLNLTLHNSSWVRMPLTLASTHPDSSKPDKIIPNESLENTGEIHPKSAHLGDSYSSSGP 354

  Fly   297 ---------------ITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKV 346
                           |||..||.||.|||:..:.|||:.|::..:.|..:.:|||||||||||::
 Frog   355 QIQNKHAEKVYFEMEITRHIFETLNEDLFQKILIPVEQVLKEGHVLKEEVDEIVLVGGSTRIPRI 419

  Fly   347 QRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHG 382
            :::::|.| ||:.|.|::||.||..|.|:||.|:.|
 Frog   420 RQVIRDFF-GKDPNTSVDPDLAVVTGVAIQAGIMGG 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_524356.1 PTZ00009 1..612 CDD:240227 168/426 (39%)
hspa13NP_001017223.1 ASKHA_NBD_HSP70_HSPA13 23..457 CDD:466835 168/426 (39%)

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