DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Hsc70-4 and Hspa13

Sequence 1:NP_001262586.1 Gene:Hsc70-4 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_062144.2 Gene:Hspa13 RGDID:3775 Length:471 Species:Rattus norvegicus

Alignment Length:430 Identity:170/431 (39%)
Similarity:247/431 (57%) Gaps:50/431 (12%)


  Fly     7 VGIDLGTTYSCVGVF--QHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTQTIFD 69
            :||||||||..||||  ..|||::|.::.|:.:.||.|:|||.:..:|..:......||..||:|
  Rat    34 IGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDGDVYVGYESLELADSNPQNTIYD 98

  Fly    70 AKRLIGRKFDDAAVQSDMKHWPFEVVSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAY 134
            |||.||:.|....:::::..:||:|:..:|..:..|| .:|.....||.:.|.:|.|:||.||.|
  Rat    99 AKRFIGKIFTPEELEAEIGRYPFKVLHKNGMAEFSVT-SNETIIVSPEYVGSRLLLKLKEMAEKY 162

  Fly   135 LGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVLIFD 199
            ||..|.||||:|||.|:..||.:|..|..:|||.:||:||||||||:||||.|  |....||:.|
  Rat   163 LGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHK--VDVFYVLVID 225

  Fly   200 LGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLR 264
            |||||.|||:|:...|:|..::.:|:..|||:||:.||:.:..:|..:.: ..|.:.|..:.|||
  Rat   226 LGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKEIYQTY-GFLPSRKEEIHRLR 289

  Fly   265 TACERAK--RTLSSSTQASI-----EIDS------------------------------LFEGTD 292
            .|.|..|  .||..|.|.|:     |.||                              |.:.|.
  Rat   290 QAVEMVKLNLTLHQSAQVSVLLTVEENDSQKPQNADSKLPEDQLTPGDGHHVNRVFRPGLSDSTS 354

  Fly   293 ------FYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQ 351
                  |.|.::|..|..||.|||:..:.|:::.|::..|||:.|.::||||||||||::::::|
  Rat   355 GKSQVLFETEVSRKLFNTLNEDLFQKILVPIQQVLKEGLLDKTEIDEVVLVGGSTRIPRIRQVIQ 419

  Fly   352 DLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDL 391
            :.| ||:.|.|::||.||..|.|:||.|..|....:|..|
  Rat   420 EFF-GKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSAL 458

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 170/431 (39%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 167/419 (40%)
Hspa13NP_062144.2 HSPA13-like_NBD 12..463 CDD:212679 170/431 (39%)
PRK13930 32..442 CDD:237564 164/413 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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