DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsc70-4 and ssc1

DIOPT Version :9

Sequence 1:NP_001262586.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_593459.1 Gene:ssc1 / 2543026 PomBaseID:SPAC664.11 Length:674 Species:Schizosaccharomyces pombe


Alignment Length:643 Identity:309/643 - (48%)
Similarity:431/643 - (67%) Gaps:38/643 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPTQT 66
            |.|.:|||||||.||:.:.:....::|||.:|.|||||.|||| |.|||:|.:||.|..:||..|
pombe    49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVINPENT 113

  Fly    67 IFDAKRLIGRKFDDAAVQSDMKHWPFEVVS-ADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKET 130
            .|..||||||:|.:..||.|:|..|:::|. ::|...:|.    ..||:.|.:|...:|:||:||
pombe   114 FFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEA----RGKTYSPSQIGGFILSKMRET 174

  Fly   131 AEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNV 195
            |..||||.|.|||:|||||||||||||||.||.||||||||::|||||||:|||||||  .:..|
pombe   175 ASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIV 237

  Fly   196 LIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRAL 260
            .:|||||||||:|||.:::|:|||:||.|||||||||||..||.|.|:.||:....||:.::.|:
pombe   238 AVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAV 302

  Fly   261 RRLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTS-----------ITRARFEELNADLFRSTM 314
            :|:|.|.|:||..|||.::..|.:       .|.|:           |:||:||:|...|.|.|:
pombe   303 QRIREAAEKAKCELSSLSKTDISL-------PFITADATGPKHINMEISRAQFEKLVDPLVRRTI 360

  Fly   315 DPVEKALRDAKLDKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAI 379
            ||.::||:||.|..|.|::::||||.||:|:|...::.:|. :|..||:|||||||.|||:|..:
pombe   361 DPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVAIGAAIQGGV 424

  Fly   380 LHGDKSQEVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
            |.|    .|:||:|||||||||||||.|||.:.||.|||||||:::|.|:|.:|.|..|.|:|::
pombe   425 LSG----HVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQ 485

  Fly   445 GERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGR 509
            |||.:.:||.|:|.|:|:||.|||:|.|||||:||:||:||:||:|.:::|||::.||:....| 
pombe   486 GERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG- 549

  Fly   510 LSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLD--EDNLKTKISDSDRTTILD 572
            |:..:||.||.:|||||..|..:||.|...|..||.|.::::.||  :|.|..:..:..|:.|.|
pombe   550 LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIHKDKLDQQAVEDLRSKITD 614

  Fly   573 KCNETIKWLDA-NQLADKEEYEHRQKELEGVCNPIITKLY--QGAGFPPGGMPGGPGG 627
             ..||:..::| ::....|:.:.:..|::.:...:...:|  |..|....|....|.|
pombe   615 -LRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYKNQNQGNESSGDNSAPEG 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_001262586.1 PTZ00009 1..612 CDD:240227 304/626 (49%)
HSPA1-2_6-8-like_NBD 6..381 CDD:212675 198/387 (51%)
ssc1NP_593459.1 dnaK 49..671 CDD:234715 308/641 (48%)
HSPA9-like_NBD 49..425 CDD:212683 200/389 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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