DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsc70-4 and stc-1

DIOPT Version :10

Sequence 1:NP_524356.1 Gene:Hsc70-4 / 41840 FlyBaseID:FBgn0266599 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_495808.2 Gene:stc-1 / 174368 WormBaseID:WBGene00006059 Length:450 Species:Caenorhabditis elegans


Alignment Length:381 Identity:154/381 - (40%)
Similarity:230/381 - (60%) Gaps:10/381 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTER-LIGDAAKNQVAMNPTQTIFD 69
            |||||||||.:|::.  .|:..|:.:|.|.::.||.|||..... |||..|..|...||.:||:|
 Worm    37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPKRTIYD 101

  Fly    70 AKRLIGRKFD--DAAVQSDMKHWPFEV-VSADGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETA 131
            |||.|||.|:  :....||.|.:||:: :.::||...|:......|..:||||.|:::..:|..|
 Worm   102 AKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGSLIIGYLKSAA 166

  Fly   132 EAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGERNVL 196
            ..:||.|:...||:.||.||:.||..|..|..||.:.|.|:|:||||||:||||.||. |..||:
 Worm   167 AKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKKQ-GVENVV 230

  Fly   197 IFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALR 261
            :.||||||.|||:|.:..|:|..::.||:..|||:||::|:..|.:.:...|..|.: .||..::
 Worm   231 VVDLGGGTLDVSVLWLQGGVFVTQAMAGNNRLGGQDFNDRVQKHLISKIAEKFGKTI-DNKEDIQ 294

  Fly   262 RLRTACERAKRTLSSSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKL 326
            ::|...|:.|..|::....:|.::....|...| .:||..||.||.||.::...|:..||.||.|
 Worm   295 QIRMEVEKGKIRLTNVPSTTISLNLKTVGKWNY-ELTRDEFETLNGDLLKAIELPITAALADANL 358

  Fly   327 DKSVIHDIVLVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHG 382
            |.:.:.:||||||||::|.|::::...|. |..|..::|:.||..||:|||.::.|
 Worm   359 DTADVDEIVLVGGSTQVPAVRKIVGRFFK-KSANYGVDPELAVVTGASVQAGVIGG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsc70-4NP_524356.1 PTZ00009 1..612 CDD:240227 154/381 (40%)
stc-1NP_495808.2 ASKHA_NBD_HSP70_HSPA13 11..416 CDD:466835 154/381 (40%)

Return to query results.
Submit another query.