DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31344 and Polr3h

DIOPT Version :8

Sequence 1:NP_650433.1 Gene:CG31344 / 41835 FlyBaseID:FBgn0051344 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_084505.2 Gene:Polr3h / 78929 MGIID:1926179 Length:204 Species:Mus musculus

Alignment Length:26 Identity:6/27 (22%)
Similarity:12/27 (44%) Gaps:10/27 (37%)


  Fly   202 GAH----------RIKLKDQDFLEAT 217
            |||          |.::.|:.|::.:
Mouse   136 GAHDLYMDTGEEIRFRVVDESFVDTS 161

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG31344NP_650433.1 DUF2236 100..>233 CDD:287016 6/27 (22%)
Polr3hNP_084505.2 RPB7 1..202 CDD:224020 6/27 (22%)
RNAP_III_Rpc25_N 2..81 CDD:239822
RNA_pol_Rbc25 79..201 CDD:285491 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG1095
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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