DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG6654 and M03D4.4

Sequence 1:NP_650429.1 Gene:CG6654 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans

Alignment Length:247 Identity:68/248 (27%)
Similarity:90/248 (36%) Gaps:40/248 (16%)


  Fly   358 YKCNECEKVFVSPDHLAEHQASHGAHNCPECG------IRCDSKEALSKHMVQGHKRNLRNQCNI 416
            |.|.:|...|.|.|.|..|:...  |...|.|      :..||.|...                 
 Worm     5 YLCRDCSGAFHSLDELQRHEREE--HETVEQGDQEEDRMEDDSDELAM----------------- 50

  Fly   417 CQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKA 481
                          ::|...:..|:.:......:.|......|....|...::||.|...|..|.
 Worm    51 --------------IKIKIEDSDFLSDTDSSQLSMNPTTPSEKSSSGEKGRYECEDCHEMFAVKR 101

  Fly   482 ELTSHARTHTGDKPFECEVCLARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTH 546
            ||.:|.|.|:|::|..|..|...|.|...|.||...|||||.:.|..|...|.....|..|...|
 Worm   102 ELATHMRIHSGEQPHSCTQCGKEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIH 166

  Fly   547 TGERPYVCPFCSKTFTQRGDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSH 598
            :|.||:.||.|.|||..:.|...|.:.|| ||.:.|..|...|.....:..|
 Worm   167 SGGRPHECPQCHKTFIFKFDLNRHMKIHQ-ERGFSCQQCGRSFLKQVMLDEH 217

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG6654NP_650429.1 zf-AD 6..79 CDD:285071
C2H2 Zn finger 331..354 CDD:275368
COG5048 <357..570 CDD:227381 59/218 (27%)
C2H2 Zn finger 360..380 CDD:275368 7/20 (35%)
C2H2 Zn finger 385..406 CDD:275370 5/27 (19%)
C2H2 Zn finger 414..434 CDD:275368 1/20 (5%)
zf-H2C2_2 427..451 CDD:290200 2/24 (8%)
C2H2 Zn finger 442..490 CDD:275368 12/48 (25%)
C2H2 Zn finger 470..487 CDD:275368 8/17 (47%)
zf-H2C2_2 482..507 CDD:290200 10/25 (40%)
C2H2 Zn finger 498..518 CDD:275368 7/20 (35%)
zf-H2C2_2 510..534 CDD:290200 11/24 (46%)
C2H2 Zn finger 526..546 CDD:275368 5/20 (25%)
zf-H2C2_2 539..563 CDD:290200 12/24 (50%)
C2H2 Zn finger 554..574 CDD:275368 8/20 (40%)
C2H2 Zn finger 582..602 CDD:275368 4/18 (22%)
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 9/20 (45%)
zf-H2C2_2 102..127 CDD:290200 10/25 (40%)
C2H2 Zn finger 118..138 CDD:275368 7/20 (35%)
C2H2 Zn finger 146..166 CDD:275368 5/20 (25%)
zf-H2C2_2 158..181 CDD:290200 11/23 (48%)
zf-C2H2 172..194 CDD:278523 8/22 (36%)
C2H2 Zn finger 174..194 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 0.615 Consistency score
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.