DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Sdr and drl

Sequence 1:NP_001287331.1 Gene:Sdr FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001260566.1 Gene:drl FlyBaseID:FBgn0015380 Length:645 Species:Drosophila melanogaster

Alignment Length:191 Identity:41/192 (21%)
Similarity:65/192 (34%) Gaps:56/192 (29%)


  Fly   703 SRNHDYRRKEFEKVINYEHLLSIKKDEEPT---RPPTTTPAPTNATLAKERLAAINYENYRLNSE 764
            |:.|........|..:::.|.:|......:   .|.|.|  ||.|||.:.      :..|....|
  Fly   271 SKRHPSNGVHLIKTSSFQRLPTISSTAHNSIYVCPSTIT--PTYATLTRP------FREYEHEPE 327

  Fly   765 KKQRDLQDLDQHKYTIR----------------------HALPKCQNSHASVVQQVEEKCVAEEP 807
            :..|.||:|...|..:|                      ..|.|....|||   |::...:.:|.
  Fly   328 EFNRRLQELTVQKCRVRLSCLVQEGNFGRIYRGTYNDCQEVLVKTVAQHAS---QLQVNLLLQES 389

  Fly   808 LSGYELPGTQHFYCLSQLEPETHYRITIRACVEGV-VNGCSTPAEAVIKTASIQ-LERFIK 866
            :..||   ..|...||.|               |: :...:||......|.|:: |:.|::
  Fly   390 MMLYE---ASHPNVLSVL---------------GISIEDYATPFVLYAATGSVRNLKSFLQ 432

Known Domains:


GeneSequenceDomainRegion External IDIdentity
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382
Furin-like 209..332 CDD:279142
Recep_L_domain 347..461 CDD:279382
FN3 491..578 CDD:214495
drlNP_001260566.1 WIF 21..157 CDD:128745
PTK_Ryk 336..606 CDD:270639 23/119 (19%)
Pkinase_Tyr 343..599 CDD:285015 21/112 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C102050064
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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