DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Sdr and Pvr

Sequence 1:NP_001287331.1 Gene:Sdr FlyBaseID:FBgn0038279 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001162911.1 Gene:Pvr FlyBaseID:FBgn0032006 Length:1577 Species:Drosophila melanogaster

Alignment Length:567 Identity:103/568 (18%)
Similarity:184/568 (32%) Gaps:197/568 (35%)


  Fly   163 FVETV---DWIYLMGNATRQHFSLKHNRPQSQCPLCGSLSADFEFIRNSSERCWNVNTTQLRPQP 224
            :||:|   :|.....:..|...|.....|::               |||:.:......|.|..||
  Fly   356 YVESVYGMEWFTPSRDENRIFASQSRTDPKT---------------RNSTHQTGRSTLTVLNAQP 405

  Fly   225 PRLKDCPIACGLNGCDSAGKCCDHNCVTGCYSQNCSLCANYQGRMGCVNQCVASYELNKRRCIGH 289
            .       ..||           :.|||...|......|.|:.::...|:   || ||.....||
  Fly   406 S-------DTGL-----------YKCVTTDNSNQNVQRATYRIKVLKQNE---SY-LNVGEPSGH 448

  Fly   290 RECRELGRIPL-----IRGYQC------------VKKCPGNQK----EILVAKGIIHCQVECNGD 333
            ...:|.....:     ..|:..            |::...|.|    |:.....:::.|::.:|.
  Fly   449 YNVQEYANRTIQMTANFEGFPTPSFSWFKPDGTEVRQSENNFKILSTELSTMLQVLNAQLQDSGT 513

  Fly   334 FHVKSAADLEVLQDCVTINGSLTIELTNIKEKIVDALENALASVKEITGYLKVIHSAQLMSLTFL 398
            :.::.:....|:|....::             ::||     .::|....|::|...|:|      
  Fly   514 YVLRGSNSFGVVQREYNVS-------------VMDA-----PALKMSDAYVQVGSVARL------ 554

  Fly   399 QNLDAIRGDKLVENKYALYVVNNY----HLEHIWP------PNHLVIIQRGTLFFHLNPR---LC 450
                     :.....|...:|..:    .||..||      .|..:..::....|...||   |.
  Fly   555 ---------ECTVRSYPPAIVTFFFRPCSLEPQWPTCSVLNQNFSLPSEQEKYQFQTRPRPGKLS 610

  Fly   451 YEKIHQLQGSLKSGENISVADVSP---NSNGERVICGDAVRSLNPKVEDLNSTAVRIILDYMDWE 512
            .|:|::          :|.....|   ....:.:|.|...|:|         |...::|..:. |
  Fly   611 VERIYE----------VSFLPTEPGILTCIAQNIIDGKERRTL---------TKAHVLLGNIS-E 655

  Fly   513 GMETLIGYSYHYKEAPVQNVTM------YDGRHGCGHDNWLM---DVVPNQSRRHVISGLKPYTQ 568
            .| |:.|:...:|.|...||..      |   |..|:..|.:   |:..:.| .|:.:.   :|:
  Fly   656 NM-TIYGFDKDHKIAKEDNVNFTCEALAY---HFDGNLKWFINGEDLKESDS-VHIETS---HTK 712

  Fly   569 YAY----FVKTLTRTE--------YHIQIDAYSKIGYFQTLPDRPSPVLRIYGSSEISSQILLHW 621
            |:|    .:.|::..:        ||...||                   :|.|.||.    |:.
  Fly   713 YSYKSTVHITTISDRDRGTYECRAYHNDKDA-------------------VYSSREID----LYV 754

  Fly   622 WPPRRPNGVIKNYFVTAEKYNATKEAKDKNYVNVELENAKDIDCECA 668
            ..|..|...           |..:|...|    ::.:.::.::.|||
  Fly   755 HDPSAPQWT-----------NGGQEGHSK----IKRKLSQTLELECA 786

Known Domains:


GeneSequenceDomainRegion External IDIdentity
SdrNP_001287331.1 Recep_L_domain 58..173 CDD:279382 4/13 (31%)
Furin-like 209..332 CDD:279142 26/144 (18%)
Recep_L_domain 347..461 CDD:279382 20/127 (16%)
FN3 491..578 CDD:214495 21/100 (21%)
PvrNP_001162911.1 IG 346..432 CDD:214652 22/109 (20%)
Ig <363..432 CDD:299845 19/102 (19%)
Ig 466..533 CDD:299845 9/80 (11%)
IG_like 672..754 CDD:214653 22/112 (20%)
Ig 674..739 CDD:143165 14/72 (19%)
IGc2 779..840 CDD:197706 3/9 (33%)
PKc_like 927..1332 CDD:304357
Pkinase_Tyr 935..1329 CDD:285015
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C102049029
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
10.930

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