DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abi and Abi2

DIOPT Version :10

Sequence 1:NP_001247091.1 Gene:Abi / 41718 FlyBaseID:FBgn0020510 Length:477 Species:Drosophila melanogaster
Sequence 2:NP_001391634.1 Gene:Abi2 / 329165 MGIID:106913 Length:542 Species:Mus musculus


Alignment Length:581 Identity:227/581 - (39%)
Similarity:294/581 - (50%) Gaps:165/581 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYYRADNKKAALEATKNYTTQSLASVAYQI 77
            |.||..|:..|||.||::|.||||||||||||||:.|.::.:|:.|||.||.|||||||||||.|
Mouse     1 MAELQMLLEEEIPGGRRALFDSYTNLERVADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLI 65

  Fly    78 NTLAYSYMQLLELQAQQLGEMESQMNHIAQTVHIHKEKVARREIGVLTANKVSSRQFKIVAPINP 142
            ||||.:.:|:|::||.||..|||.:|||:|||.||||||||||||:||.||.:||..||:||.|.
Mouse    66 NTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPANL 130

  Fly   143 EKPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSL----LPPSVGPPPTTKPPT 203
            |:|::|:||||||::||:||||:......:|          |.|::    ||.:.  |||.|||:
Mouse   131 ERPVRYIRKPIDYTILDDIGHGVKWLLRFKV----------STQNMKMGGLPRTT--PPTQKPPS 183

  Fly   204 PPQMSRAGNTGTLGKSVSNTGTLGKSSREYRTPPVVNPPQVPSHYAPNYPIGH-------PKRMS 261
            ||              :|..||||:.| .|||...|.||.||:.|.|: |..:       |.|.:
Mouse   184 PP--------------MSGKGTLGRHS-PYRTLEPVRPPVVPNDYVPS-PTRNMAPSQQSPVRTA 232

  Fly   262 TASSTMTTTTTGGGAAGNERAAGYSA----------------LPMPPS------------QQIAT 298
            :.:....|.::.|.:.|:..::..|:                .|.|||            ...||
Mouse   233 SVNQRNRTYSSSGSSGGSHPSSRSSSRENSGSGSVGVPIAVPTPSPPSVFPAPAGSAGTPPLPAT 297

  Fly   299 HVNLP----------------SAGMMQSL-----PPPPPTTYDDRSSMPP--------------- 327
            ..::|                :||..|||     .|.||..    ||.||               
Mouse   298 SASVPTPLVPATVPSSTAPDAAAGGAQSLADGFTSPTPPVI----SSNPPTGHPVQFYSMNRPAS 358

  Fly   328 --APPS----------PLTVSQHEMTEQSHIGMHTLGRNINRNP--NRNHFSLNFARPG------ 372
              .||:          |...||..:..|           :|..|  |:|..||....|.      
Mouse   359 RHTPPTIGGSLPYRRPPSITSQTSLQNQ-----------MNGGPFYNQNPVSLAPPPPSILQVTP 412

  Fly   373 ---------------SQSPPLPPP---------PPPEDEHQDFGRPRTSTGPQLAPIVPEDQNLP 413
                           |.:||.|||         |||....:|:.....:......|...||   |
Mouse   413 QLPLMGFVARVQENISDTPPPPPPVEEPVFDESPPPPPPPEDYEEEEAAVVEYSDPYAEED---P 474

  Fly   414 GWVPKNFIEKVVAIYDYYADKDDELSFQESSVLYVLKKNDDGWWEGVMDGVTGLFPGNYVE 474
            .|.|:.::|||||||||..||:|||||||.:::||:|||||||:||||:||||||||||||
Mouse   475 PWAPRAYLEKVVAIYDYTKDKEDELSFQEGAIIYVIKKNDDGWYEGVMNGVTGLFPGNYVE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AbiNP_001247091.1 Abi_HHR 105..168 CDD:462279 42/62 (68%)
SH3_Abi 423..474 CDD:212760 40/50 (80%)
Abi2NP_001391634.1 Abi_HHR 93..156 CDD:462279 42/62 (68%)
PHA03247 <270..406 CDD:223021 31/150 (21%)
SH3_Abi2 481..541 CDD:212905 43/55 (78%)

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