DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abi and Abi2

DIOPT Version :10

Sequence 1:NP_001247091.1 Gene:Abi / 41718 FlyBaseID:FBgn0020510 Length:477 Species:Drosophila melanogaster
Sequence 2:XP_063122818.1 Gene:Abi2 / 286928 RGDID:628771 Length:570 Species:Rattus norvegicus


Alignment Length:551 Identity:206/551 - (37%)
Similarity:277/551 - (50%) Gaps:142/551 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MDELASLIRTEIPDGRQSLRDSYTNLERVADYCEDTYYRADNKKAALEATKNYTTQSLASVAYQI 77
            |.||..|:..|||.||::|.||||||||||||||:.|.::.:|:.|||.||.|||||||||||.|
  Rat     1 MAELQMLLEEEIPGGRRALFDSYTNLERVADYCENNYIQSPDKQRALEETKAYTTQSLASVAYLI 65

  Fly    78 NTLAYSYMQLLELQAQQLGEMESQMNHIAQTVHIHKEKVARREIGVLTANKVSSRQFKIVAPINP 142
            ||||.:.:|:|::||.||..|||.:|||:|||.||||||||||||:||.||.:||..||:||.|.
  Rat    66 NTLANNVLQMLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTSRTHKIIAPANL 130

  Fly   143 EKPIKYVRKPIDYSMLDEIGHGINSAQHSQVRQKHRGSSHGSVQSL----LPPSVGPPPTTKPPT 203
            |:|::|:||||||::||:||||:......:|          |.|::    ||.:.  |||.|||:
  Rat   131 ERPVRYIRKPIDYTILDDIGHGVKWLLRFKV----------STQNMKMGGLPRTT--PPTQKPPS 183

  Fly   204 PPQMSRAGNTGTLGKSVSNTGTLGKSSREYRTPPVVNPPQVPSHYAPNYPIGH-------PKRMS 261
            ||              :|..||||:.| .|||...|.||.||:.|.|: |..:       |.|.:
  Rat   184 PP--------------MSGKGTLGRHS-PYRTLEPVRPPVVPNDYVPS-PTRNMAPSQQSPVRTA 232

  Fly   262 TASSTMTTTTTGGGAAGNERAAGYSALPMPPSQQIATHVNLPSAGMMQSLP--------PPPPTT 318
            :.:....|.::.|.:.|:..::..|:.....|..:...:.:|:.......|        ||.|.|
  Rat   233 SVNQRNRTYSSSGSSGGSHPSSRSSSRENSGSGSVGVPIAVPTPSPPSVFPAPAGSAGTPPLPAT 297

  Fly   319 YDDRSSMPPAPPSPLTVSQHEMTEQSHIGMHTLGRN--------INRNPNRNH----FSLN---- 367
                |:..|.|..|.||......:.:..|..||...        |:.||...|    :|:|    
  Rat   298 ----SASVPTPLVPATVPSSTAPDAAAGGAQTLADGFTSPTPPVISSNPPTGHPVQFYSMNRPAS 358

  Fly   368 ------------FARPGS------------------QSP----------------PL-------- 378
                        :.||.|                  |:|                ||        
  Rat   359 RHTPPTIGGSLPYRRPPSITSQTSLQNQMNGGPFYNQNPVSLAPPPPILQVTPQLPLMGFVARVQ 423

  Fly   379 ------PPPPPPEDE------------HQDFGRPRTSTGPQLAPIVPEDQNLPGWVPKNFIEKVV 425
                  ||||||.||            .:|:.....:......|...||   |.|.|::::||||
  Rat   424 ENISDTPPPPPPVDEPVFDESPPPPPPPEDYEEEEAAVVEYSDPYAEED---PPWAPRSYLEKVV 485

  Fly   426 AIYDYYADKDDELSFQESSVLYVLKKNDDGW 456
            |||||..||:|||||||.:::||:||||||:
  Rat   486 AIYDYTKDKEDELSFQEGAIIYVIKKNDDGF 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AbiNP_001247091.1 Abi_HHR 105..168 CDD:462279 42/62 (68%)
SH3_Abi 423..474 CDD:212760 25/34 (74%)
Abi2XP_063122818.1 None

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