DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCHa1 and CCHa2

DIOPT Version :8

Sequence 1:NP_001097784.1 Gene:CCHa1 / 41711 FlyBaseID:FBgn0038199 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001189216.1 Gene:CCHa2 / 41648 FlyBaseID:FBgn0038147 Length:136 Species:Drosophila melanogaster

Alignment Length:29 Identity:15/30 (50%)
Similarity:17/30 (57%) Gaps:0/30 (0%)


  Fly    11 VVLVALFALVTGSCLEYGHSCWGAHGKRS 39
            |||.|..:.....|..|||.|:|.|||||
  Fly    15 VVLAAQQSQAKKGCQAYGHVCYGGHGKRS 43



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR35980
RoundUp 00.000 Not matched by this tool.
11.100

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