DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and AT3G44100

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_189996.1 Gene:AT3G44100 / 823530 AraportID:AT3G44100 Length:152 Species:Arabidopsis thaliana


Alignment Length:158 Identity:38/158 - (24%)
Similarity:54/158 - (34%) Gaps:27/158 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSLGLFVIFAALIGFTSSTDVSQCPKSKSKALAAGDVSISNCPKSKCILKRNTEASIQMKIRPER 67
            |.|.|.|.|...:..||.|   .|.|........| |.||..|..       :.|:...||    
plant    10 LLLLLSVFFLPALHATSFT---YCDKRLDPVKVTG-VKISPDPVV-------SGAAATFKI---- 59

  Fly    68 DFQELTSDIQG--IILDVPLPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKNSFKILPVY 130
             |.....||.|  :::.|.     |.|.......:|...|  ..||:..|. :...:|..:..:.
plant    60 -FGSTGEDISGGKVVIRVL-----YVGIPVHTETHDLCDE--TACPVAPGS-FVLSHSQTLPSIT 115

  Fly   131 PTVSLEIHWGLGDKHGD-AACFQIPAKI 157
            |..:..:...:.||:|. ..|.....||
plant   116 PPGTYTLKMTINDKNGGRLTCISFKFKI 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 28/134 (21%)
AT3G44100NP_189996.1 PG-PI_TP 27..141 CDD:238459 29/137 (21%)

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