DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Npc2b and Npc2h

Sequence 1:NP_650331.1 Gene:Npc2b FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001247376.1 Gene:Npc2h FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster

Alignment Length:166 Identity:36/167 (22%)
Similarity:66/167 (40%) Gaps:21/167 (13%)


  Fly     1 MKLSLGLFVIFAALIGFTSSTDVS-QCPKSKSKALAAGDVSISNCPKSK----CILKRNTEASIQ 60
            ::||..|.|.||.::...|:..|: |..:....:.:...|.::.||::.    |.::|....::.
  Fly     2 LRLSSLLPVAFALVLSSVSAEIVNFQTCEDSVDSCSISQVRVTPCPEANANAACHIRRRHRFTMS 66

  Fly    61 MKIRPERDFQELTSDI---QGIILDVPLPFPGYYGTSACPHIYDEAGEKKVGCPLKAGQVYTYKN 122
            ....|..|...|.:.:   :...:::||            ...|:...|...||:::|...||.|
  Fly    67 FDFTPHFDADTLVASLGWAKSENVELPL------------LTMDQEACKYTTCPVRSGVTQTYTN 119

  Fly   123 SFKILPVYPTVSLEIHWGLGDKHGD-AACFQIPAKI 157
            :......:|.....|.|.|.|.... ..||.|..|:
  Fly   120 NMPADARFPLSPYTIRWALKDPVSQKRCCFTIDIKV 155

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 28/141 (20%)
Npc2hNP_001247376.1 Npc2_like 26..153 CDD:238458 27/139 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S6567
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001503
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR11306
RoundUp 00.000 Not matched by this tool.
33.050

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