DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2b and Npc2h

DIOPT Version :10

Sequence 1:NP_650331.1 Gene:Npc2b / 41710 FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_651824.1 Gene:Npc2h / 43649 FlyBaseID:FBgn0039801 Length:157 Species:Drosophila melanogaster


Alignment Length:255 Identity:50/255 - (19%)
Similarity:95/255 - (37%) Gaps:73/255 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IW--PCDRECGK--FHERFINTTKL------------------RRMKTMSESVDHQIPMTNG--- 55
            :|  ||.|...|  :..|.:|.|.|                  ..||.::....||:...:.   
  Fly  1383 VWPYPCSRPLFKTCWLYRSVNLTSLSAVGLQLRILWTCLRWDDMAMKPLTADGKHQVTTESEIMS 1447

  Fly    56 ----KSKTKGVFEEIMEMAARKDSQNFIEVPLPSLPE----EFQSLTLGSKKRAKRQSTKDADTT 112
                :.:..|:|.|.::...||     :.:|| .||:    |.||:..|.:||.:.:|       
  Fly  1448 LELLRHRHVGMFNERLQYLRRK-----VVIPL-ELPKTVRAEVQSIRSGLRKRKRAES------- 1499

  Fly   113 MIFFDNPVWDDAKFRQELLDSD-------------EERYSIGDA-PYIMDDDDTL---DDILRDT 160
                  |...:.:..:|.:|.|             :|:.:...| |...:....|   :.:..|:
  Fly  1500 ------PQQTEPQVSEEWIDEDKLELWEIKLYGEKQEKLAAASAQPVTRNSTGKLPVNNRMAADS 1558

  Fly   161 YHESASNPIEHYQTDETILSSDDENDYSTLDLRQQANGSFRSPKLLVPSLRSPDAKYEGS 220
              .|:::|....|::::  |:...|..|..::.::.....|..:......|:.:.|.|||
  Fly  1559 --SSSASPGGGAQSNKS--SASGGNKASRDEINEKMEQQLRLQRAAHNQKRAMELKQEGS 1614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 33/179 (18%)
Npc2hNP_651824.1 Npc2_like 26..153 CDD:238458
Blue background indicates that the domain is not in the aligned region.

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