DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Npc2b and Npc2f

Sequence 1:NP_650331.1 Gene:Npc2b FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_651219.1 Gene:Npc2f FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster

Alignment Length:124 Identity:32/125 (26%)
Similarity:52/125 (42%) Gaps:18/125 (14%)


  Fly    39 VSISNCPKSKCILKRNTEASIQMKIRPERDFQELTSDIQGIILDVPLPFPGYYGTSACPHIYDEA 103
            :.|.:|....|.:.||  |:|::.:|    |.:..:.:..:..:|...| .|..|.|.  |..:.
  Fly    58 LDIESCTTLPCSMARN--ATIKVTVR----FDDNGNGVSFLKHEVRWVF-NYIKTQAA--ITPDP 113

  Fly   104 GEKKVGC--PLKAGQVYTYKNSF--KILPVYPTVSLEIHWGLGDKHG-DAACFQIPAKI 157
            .:...||  ....|:.| :.|.|  :.|||.....|   |...|.:. :..|||:|..|
  Fly   114 CDGDHGCIESASGGKAY-WANIFVNETLPVMKGSML---WESKDANDQNLICFQVPVVI 168

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 31/121 (26%)
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 31/121 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 0 Normalized mean entropy S6567
OrthoDB 1 1.010 D1612792at2759
OrthoFinder 1 1.000 FOG0001503
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR11306
RoundUp 00.000 Not matched by this tool.
44.060

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