DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Npc2b and Npc2

Sequence 1:NP_650331.1 Gene:Npc2b FlyBaseID:FBgn0038198 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_775141.2 Gene:Npc2 RGDID:628756 Length:152 Species:Rattus norvegicus

Alignment Length:154 Identity:42/155 (27%)
Similarity:71/155 (46%) Gaps:17/155 (11%)


  Fly     9 VIFAALIGFTSSTDV--SQCPKSKSKALAAGDVSISNCPKSKCILKRNTEASIQMKIRPERDFQE 71
            ::..||:..|.:..:  ..|   .||.....:|::|.||...|.|.:....|:.:........|.
  Rat    11 ILLLALVAATQAEPLHFKDC---GSKVGVIKEVNVSPCPTQPCQLHKGQSYSVNVTFTSGTQSQN 72

  Fly    72 LTSDIQGIILDVPLPFPGYYGTSACPHIYDEAGEK-KVGCPLKAGQVYTYKNSFKILPVYPTVSL 135
            .|:.:.||:..||:.||          |.:..|.| .:.||::..:||:|.|...:...||::.|
  Rat    73 STALVHGILAGVPVYFP----------IPEPDGCKCGINCPIQKDKVYSYLNKLPVKSEYPSLKL 127

  Fly   136 EIHWGL-GDKHGDAACFQIPAKIK 158
            .:.|.| .||..:..|::||.:||
  Rat   128 VVEWKLQDDKKDNLFCWEIPVEIK 151

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Npc2bNP_650331.1 Npc2_like 23..155 CDD:238458 37/136 (27%)
Npc2NP_775141.2 Npc2_like 27..148 CDD:238458 37/134 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG4063
Hieranoid 1 1.000
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1612792at2759
OrthoFinder 1 1.000 FOG0001503
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11306
Phylome 00.000 Not matched by this tool.
TreeFam 1 0.960
65.970

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