DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and hmx1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001106998.1 Gene:hmx1 / 797503 ZFINID:ZDB-GENE-080204-54 Length:282 Species:Danio rerio


Alignment Length:74 Identity:35/74 - (47%)
Similarity:47/74 - (63%) Gaps:6/74 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 PGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRT 441
            |||      .:.|:.||.||.||:.:||..|:..:|:..:||..||.:|:|:|||||:||||||.
Zfish   145 PGS------ARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRN 203

  Fly   442 KHKRMQQED 450
            |.||....|
Zfish   204 KWKRQLAAD 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
hmx1NP_001106998.1 Homeodomain 151..207 CDD:459649 29/55 (53%)

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