Protein Alignment ems and lbx1b

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001156784.1
• Gene: lbx1b / 793810
• ZFINID: ZDB-GENE-050309-27
• Length: 265
• Species: Danio rerio
• Alignment Length: 280
• Identity: 65/280 - (23%)
• Similarity: 87/280 - (31%)
• Gaps: 103/280 - (36%)

  Fly   278 PMPQGQPGLPDIKALPPY----INAPPELPPQHNPHLIAAA----------------QFQMAAAL 322
            |:....|.....|.|.|:    |.:.|.:...|..|.:.|:                |.....||
Zfish    20 PLDHLPPPASSNKPLTPFSITDILSKPTVKRFHRIHRLPASDRVRQSITVSRQTLITQASPLCAL 84

  Fly   323 Q-------AGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHR-FPGS 379
            |       .|..||...||....||                             ::|..| .|
Zfish    85 QELASKTFKGLELGVLQAAEGKDGL-----------------------------KLFGQRDSP-- 118

  Fly   380 FLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHK 444
                  :|.::.||||:..||.:||..|...:|:..|:|..:|..|.|:..||..||||||.|.|
Zfish   119 ------KKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLK 177

  Fly   445 R----MQQEDEK------------------------GGEGGSQRNMHNGSGDE----------DD 471
            |    |:.:.|.                        |..|..........|.|          ..
Zfish   178 RDLEEMKADVESVRSTGLVPLDKLAKLADLERCAAAGATGNPGPQCSPRLGHEYKTVHKLCLSPM 242

  Fly   472 DELIDMEMDECPSDEEHELD 491
            ..|.|....:|..|||.|:|
Zfish   243 SSLSDHTSQDCSEDEEVEID 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
lbx1b	NP_001156784.1	Homeodomain	122..178	CDD:459649	24/55 (44%)