Protein Alignment ems and Dbx2

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001418946.1
• Gene: Dbx2 / 541457
• RGDID: 1359605
• Length: 377
• Species: Rattus norvegicus
• Alignment Length: 320
• Identity: 79/320 - (24%)
• Similarity: 114/320 - (35%)
• Gaps: 118/320 - (36%)

  Fly   181 RSPAPPAMEQAENPAQRIQPPHTP--------PKSVSPQSSQ----PSSSPTLLISSP------- 226
            |||.|..   |.:.:.|.:.|..|        |.:|:.|:..    .:||..|.:.:|
  Rat    37 RSPDPAG---ALSRSPRTRSPRLPGQRARTMLPSAVAAQAGAYWDVVASSALLGLPAPGFGSLGK 98

  Fly   227 ---------------HATPPQQQQQQPPPNYPKPAMMHPGGAGP-----MMMPGMPPAGLVRPFP 271
                           ||          ||: |:||      |||     ..:|..|.     |..
  Rat    99 SFLIENLLRAGAGPTHA----------PPS-PRPA------AGPECPQLRSLPANPV-----PLK 141

  Fly   272 MGPGGP-------PMPQGQ-PGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVL 328
            :.|.||       .||.|: ||..|..       ..|..|....|.|::|..|..|..  .|...
  Rat   142 LCPAGPFGARWAFQMPPGRAPGERDSA-------FQPSAPVPSKPFLLSAGPFYSACC--GGSCR 197

  Fly   329 GPAAAAAAAA---GLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKR 390
            .||:..|.:.   |||.          :.:||..     .:|.|.:
  Rat   198 RPASPTAFSREEHGLPL----------LTQDSNS-----KARRGIL------------------- 228

  Fly   391 IRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED 450
            .|..||..|...||..|:..:|:...:|:.||.:|.|.|:|||:||||||.|.:..::::
  Rat   229 RRAVFSEDQRKALEKMFQKQKYISKTDRRKLAISLGLKESQVKIWFQNRRMKWRNSKEKE 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	24/55 (44%)
Dbx2	NP_001418946.1	PHA03247	<39..186	CDD:223021	40/178 (22%)
		Homeodomain	229..283	CDD:459649	24/53 (45%)