Protein Alignment ems and Bsx

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_001178924.1
• Gene: Bsx / 500982
• RGDID: 1565120
• Length: 232
• Species: Rattus norvegicus
• Alignment Length: 223
• Identity: 62/223 - (27%)
• Similarity: 83/223 - (37%)
• Gaps: 80/223 - (35%)

  Fly   277 PPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLP 341
            |.:..|.|.:|....|.|:.:.|......|:|:.:                        |.:|:|
  Rat    50 PLLDYGYPLMPTPTLLTPHTHHPLHKGEHHHPYFL------------------------ATSGMP 90

  Fly   342 PHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPH----RFPGSFLVPPFRKPKRIRTAFSPSQLLK 402
            ..|                          :|||    ..||...     :.::.||.||.|||..
  Rat    91 VPA--------------------------LFPHPQHAELPGKHC-----RRRKARTVFSDSQLSG 124

  Fly   403 LEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHK---RMQQEDEKGGEG-----GSQ 459
            ||..||..:|:...||..||..|:|||||||.||||||.|||   |..|::.|..:|     ||.
  Rat   125 LEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQLRKSQDEPKAADGPESPEGSP 189

  Fly   460 RNMHNGSGD-------------EDDDEL 474
            |.......|             |.:||:
  Rat   190 RAPEGAPADARLSLPAGAFVLTEPEDEV 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	33/58 (57%)
Bsx	NP_001178924.1	Homeodomain	111..167	CDD:459649	32/55 (58%)