Protein Alignment ems and Ubx

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 161
• Identity: 47/161 - (29%)
• Similarity: 69/161 - (42%)
• Gaps: 48/161 - (29%)

  Fly   327 VLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWL------------------LSRHGRI-- 371
            :.|.||..|||:.|  |.|          .::..|||:                  |:::|.|
  Fly   218 ISGAAAQTAAASSL--HQA----------SNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGIST 270

  Fly   372 -----FPHRFPGSFLVPPFRKP----KRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNLNL 427
                 :.....|| |:|.:...    :|.|..::..|.|:||..|.:|.|:....|..:|..|.|
  Fly   271 DMGKRYSESLAGS-LLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCL 334

  Fly   428 SETQVKVWFQNRRTKHKRMQQ------EDEK 452
            :|.|:|:||||||.|.|:..|      |.||
  Fly   335 TERQIKIWFQNRRMKLKKEIQAIKELNEQEK 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	23/55 (42%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	23/55 (42%)