DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and HOXB5

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_002138.1 Gene:HOXB5 / 3215 HGNCID:5116 Length:269 Species:Homo sapiens


Alignment Length:239 Identity:65/239 - (27%)
Similarity:93/239 - (38%) Gaps:54/239 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 NYPKPAMMHPGGAGPMMMPGMPPA-----------GLV----RPFPMGPGGPPMPQGQPGLPDIK 290
            :|..||.||.|..| ....||..:           |.|    |.||.....|...|.        
Human    33 SYRDPAAMHTGSYG-YNYNGMDLSVNRSSASSSHFGAVGESSRAFPAPAQEPRFRQA-------- 88

  Fly   291 ALPPYINAPPELP----PQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNP 351
            |....:::|..||    ..|.....|::....|.:..:.........|:|::. |..||..:.:|
Human    89 ASSCSLSSPESLPCTNGDSHGAKPSASSPSDQATSASSSANFTEIDEASASSE-PEEAASQLSSP 152

  Fly   352 GMAR---------------DSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTAFSPSQLL 401
            .:||               .:.|::||:...|   ..|...|.       ..||.|||::..|.|
Human   153 SLARAQPEPMATSTAAPEGQTPQIFPWMRKLH---ISHDMTGP-------DGKRARTAYTRYQTL 207

  Fly   402 KLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKR 445
            :||..|..|:|:....|..:|..|.|||.|:|:||||||.|.|:
Human   208 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
HOXB5NP_002138.1 PRK07003 <67..>171 CDD:235906 22/112 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..173 18/104 (17%)
Antp-type hexapeptide 176..181 2/4 (50%)
Homeodomain 195..251 CDD:459649 27/55 (49%)

Return to query results.
Submit another query.