DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and HOXB3

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:517 Identity:113/517 - (21%)
Similarity:159/517 - (30%) Gaps:229/517 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 MAPPAHGLP--------------YPHPHAQQQHLQAPHPHPHLSPAQQHVLHQHLLMQQQHPG-- 132
            |||||...|              :|...|:.| |.|.......|||:              ||  
Human     1 MAPPALPTPRRAPVSCRSSRLATWPALKARVQ-LGARRARGSRSPAR--------------PGRS 50

  Fly   133 --------TPKSHQDIQELLQRLHHNAA--------MASGLSPLQTRLSPETEQPQMAVSL---- 177
                    .|:....|:.||.....|.|        .||...||          ||:..:|    
Human    51 GSFSGNWRLPRPECQIRALLGPWRPNKAGGGGGGGVGASASGPL----------PQLGGTLGGCW 105

  Fly   178 ------------KRERSP-----------AP-----PAMEQAENPAQRIQPPH-----TP----- 204
                        .|.|||           ||     ||..:...|:.|   ||     :|     
Human   106 GLLRVERLGCGWLRRRSPSLGRGSGAWQSAPARTQRPAARRCPRPSGR---PHRRGDLSPAARSG 167

  Fly   205 ------------PKSVSPQSS--------QPSSSPTLLISSPHATPPQQQQQQPPPNYPKPAMMH 249
                        |.||:..::        ...|..:|..::|||...:..               
Human   168 ARCEYILCLPVLPSSVAKAATHLEGDYQRSACSLQSLGNAAPHAKSKELN--------------- 217

  Fly   250 PGGAGPMMMPGMPPAGLVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAA 314
                |..|.||:.|..|..|    ||.|| |...|                              
Human   218 ----GSCMRPGLAPEPLSAP----PGSPP-PSAAP------------------------------ 243

  Fly   315 QFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGM-ARDSYQLYPWLL-SRHGRIFPHRFP 377
               .:|...:.:..||:.:.      ||..     .||. :..:.|::||:. ||......:..|
Human   244 ---TSATSNSSNGGGPSKSG------PPKC-----GPGTNSTLTKQIFPWMKESRQTSKLKNNSP 294

  Fly   378 GSF------------------------------LVPPFRKPKRIRTAFSPSQLLKLEHAFESNQY 412
            |:.                              ..|.....||.|||::.:||::||..|..|:|
Human   295 GTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSAQLVELEKEFHFNRY 359

  Fly   413 VVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ----EDEKGG---EGGSQRNMHNGSG 467
            :....|..:|..|||||.|:|:||||||.|:|:.|:    ....||   .|...:.|.:.:|
Human   360 LCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAG 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 28/55 (51%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 28/55 (51%)
DUF4074 513..576 CDD:463833
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.