DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXB2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_002136.1 Gene:HOXB2 / 3212 HGNCID:5113 Length:356 Species:Homo sapiens


Alignment Length:252 Identity:72/252 - (28%)
Similarity:96/252 - (38%) Gaps:70/252 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SSQPS------SSPTLLISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPF 270
            :||||      |.|.:|.:...::..:.....|||.:.:        ..|.:.||.......|..
Human    13 NSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPFEQ--------TFPSLQPGASTLQRPRSQ 69

  Fly   271 PMGPGGPPMPQGQPGLPDIKALPPYINAPPELP------PQHNPHLIAAAQFQMAAALQAGHVLG 329
            .....||.:|...|  |.:.|.||    .||.|      ....|...|.:....|:|:.|..|..
Human    70 KRAEDGPALPPPPP--PPLPAAPP----APEFPWMKEKKSAKKPSQSATSPSPAASAVPASGVGS 128

  Fly   330 PAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRKPKRIRTA 394
            |    |...|||....      |.||                                  |:|||
Human   129 P----ADGLGLPEAGG------GGAR----------------------------------RLRTA 149

  Fly   395 FSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDE 451
            ::.:|||:||..|..|:|:....|..:|..|:|:|.||||||||||.||||..|..|
Human   150 YTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHRE 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 29/55 (53%)
HOXB2NP_002136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..142 29/126 (23%)
Antp-type hexapeptide 94..99 2/4 (50%)
Homeodomain 144..200 CDD:459649 30/89 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..240 6/10 (60%)

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