DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and HOXB1

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_002135.2 Gene:HOXB1 / 3211 HGNCID:5111 Length:301 Species:Homo sapiens


Alignment Length:338 Identity:88/338 - (26%)
Similarity:121/338 - (35%) Gaps:103/338 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 GLSPLQTRLSPETEQPQMAVSLKRERSP-------APPAMEQAEN-PAQRIQPPHT---PPKSVS 209
            |.|......:|.:..|..|.::....|.       :.||.:|... |||  |||.|   |..|.:
Human    18 GPSAYSAHSAPTSFPPSSAQAVDSYASEGRYGGGLSSPAFQQNSGYPAQ--QPPSTLGVPFPSSA 80

  Fly   210 PQSSQPSSSPTLLISSPHATPPQQQ---QQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFP 271
            |....|::      .||...|.|..   |.:....|     .||...|..:      .||...:.
Human    81 PSGYAPAA------CSPSYGPSQYYPLGQSEGDGGY-----FHPSSYGAQL------GGLSDGYG 128

  Fly   272 MGPGGPPMPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAA 336
            .|..||               .||   ||:.||..|..                    .|:.|.|
Human   129 AGGAGP---------------GPY---PPQHPPYGNEQ--------------------TASFAPA 155

  Fly   337 AAGL------PPHAAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLV--PPFRKPKRIRT 393
            .|.|      .|..::  ||...||    .:.|:..:...      |.:..|  |....|..:||
Human   156 YADLLSEDKETPCPSE--PNTPTAR----TFDWMKVKRNP------PKTAKVSEPGLGSPSGLRT 208

  Fly   394 AFSPSQLLKLEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQED-------- 450
            .|:..||.:||..|..|:|:..|.|..:|..|.|:|||||:||||||.|.|:.::|:        
Human   209 NFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKREREEGRVPPAPP 273

  Fly   451 ----EKGGEGGSQ 459
                |..|:...|
Human   274 GCPKEAAGDASDQ 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 27/55 (49%)
HOXB1NP_002135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..77 16/58 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..149 10/59 (17%)
Antp-type hexapeptide 179..184 1/4 (25%)
Homeodomain 207..260 CDD:459649 27/52 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..301 8/33 (24%)

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