DRSC/TRiP Functional Genomics Resources

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Protein Alignment ems and Gsx2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_573555.1 Gene:Gsx2 / 14843 MGIID:95843 Length:305 Species:Mus musculus


Alignment Length:332 Identity:102/332 - (30%)
Similarity:129/332 - (38%) Gaps:103/332 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 TLLISSPHATPPQQQQQQPPPNY------PKPAMMHPGGAG-PMMMPG----------------M 261
            :|:|.......|...:..|.|::      |.|.:|...|.| |....|                .
Mouse     9 SLIIKDSSRPAPSLPESHPGPDFFIPLGMPSPLVMSVSGPGCPSRKSGAFCVCPLCVTSHLHSSR 73

  Fly   262 PPAGLVRPFPMGPG----------GPPMPQGQPGLPDIKALPPYINAPPEL-------------- 302
            ||||      .|.|          |..:..|...||.:|:  .:..||.:.              
Mouse    74 PPAG------AGGGATGTAGAAVAGGGVAGGTGALPLLKS--QFSPAPGDAQFCPRVSHAHHHHH 130

  Fly   303 PPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLPPHAAQFMPNPGMARDSYQLYPWLLSR 367
            ||||:.|.....|...|||  |......|||||||.|.|.|.|     |..|..:|.:..     
Mouse   131 PPQHHHHHHQPQQPGSAAA--AAAAAAAAAAAAAALGHPQHHA-----PVCAATTYNMSD----- 183

  Fly   368 HGRIFPHRF-------PGSFLVPPFRKPKRIRTAFSPSQLLKLEHAFESNQYVVGAERKALAQNL 425
                 |.||       ..:..||   ..||:||||:.:|||:||..|.||.|:....|..:|..|
Mouse   184 -----PRRFHCLSMGGSDTSQVP---NGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYL 240

  Fly   426 NLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNG----------SGDEDDDELIDMEMD 480
            ||||.|||:||||||.|||       |.|:|.| ||.|..          :..||:|.|.....:
Mouse   241 NLSEKQVKIWFQNRRVKHK-------KEGKGAS-RNNHTSCKCVGSQAHYARSEDEDSLSPASAN 297

  Fly   481 ECPSDEE 487
            |   |:|
Mouse   298 E---DKE 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649 33/55 (60%)
Gsx2NP_573555.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..151 9/37 (24%)
Homeodomain 204..260 CDD:459649 34/62 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..305 15/54 (28%)

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