Protein Alignment ems and gbx1

DIOPT Version :10

• Sequence 1: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_777286.1
• Gene: gbx1 / 142985
• ZFINID: ZDB-GENE-020117-2
• Length: 316
• Species: Danio rerio
• Alignment Length: 323
• Identity: 89/323 - (27%)
• Similarity: 120/323 - (37%)
• Gaps: 110/323 - (34%)

  Fly   214 QPSSSPTLL-ISSPHATPPQQQQQQPPPNYPKPAMMHPGGAGPMMMP-----------------G 260
            :||.:.|.. |.|...||      ||.|.:    :::.|  .||.||                 |
Zfish     3 RPSGTGTAFSIDSLIGTP------QPRPGH----LLYTG--YPMFMPYRPLMIPQALSHSSLPSG 55

  Fly   261 MPP-------AG-LVRPFPMGPGGPPMPQGQPGLPDIKALPPYINAPPE--LPP----------- 304
            :||       || |...|..|.|     ||.|.:..:....|..:.||:  .||
Zfish    56 IPPLAPLASFAGRLTNTFCAGLG-----QGMPSMVALTTTLPSFSDPPDSFYPPQEMPGPRLGAD 115

  Fly   305 ------QHNPH--LIAAAQFQMAAALQAGHVLGPA-------------AAAAAAAGLPPHAA--- 345
                  |.:||  |..:.........||  |.|..             ||.||.:.....:|
Zfish   116 GTGMNRQESPHDELKGSELLNFTETFQA--VAGETKLYSSDDEKLDLKAAEAACSDREDSSADSE 178

  Fly   346 --QFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPP---FRKPKRIRTAFSPSQLLKLEH 405
              .|......|.         .|:.|::   :......:||   ..|.:|.||||:..|||:||.
Zfish   179 NESFSDGNTCAS---------ASQKGKL---KGGSQDALPPGGSAGKSRRRRTAFTSEQLLELEK 231

  Fly   406 AFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQEDEKGGEGGSQRNMHNGSGD 468
            .|...:|:...||..:|..|.|||.|||:||||||.|.||:     |.|      |::|.||:
Zfish   232 EFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI-----KAG------NVNNRSGE 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	29/55 (53%)
gbx1	NP_777286.1	Homeodomain	215..271	CDD:459649	29/55 (53%)