DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ems and hmx2

DIOPT Version :10

Sequence 1:NP_731868.1 Gene:ems / 41697 FlyBaseID:FBgn0000576 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:258 Identity:53/258 - (20%)
Similarity:90/258 - (34%) Gaps:80/258 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 ITGILGGIGKMLESKIDTINVPAEMVMGKWFQMYKAAMNFDVVRTTMFC-PVAYFSPNPIMGE-- 137
            :|.|...:.|:.|.:::.|.|..|        .|.||..   .|...|| |.:  :|:|::..  
 Frog   254 LTQIAKVVIKICEHEMNEIEVCPE--------CYLAACQ---KRDNWFCEPCS--NPHPLVWAKL 305

  Fly   138 EGFSMQEAYRVVSKTGPIETY---KRDMNKVGPGQYWMYTEEYFYPRQFYIIGAGPSFNNGTRNS 199
            :||....|..:..|.|.::..   :.|...|.....::.::|.    .|.:......||:..:..
 Frog   306 KGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEI----PFSVKKTKSIFNSAMQEM 366

  Fly   200 TEPLQYLIASDANRLSLMVYARDPLVFFQKYNKEVVEFMNGHGFGGNVFWNSPKPIYQGPDCEW- 263
            .                        |:.:...::         ||  ||..||......|:.:: 
 Frog   367 E------------------------VYVENIRRK---------FG--VFNYSPFRTPYTPNSQYQ 396

  Fly   264 -------PS------EKEVFARRVLKNQEMNERNKNGTSDPILSG-----MPLADMIRDPKRT 308
                   ||      :|:   .:|..|.:|....|...|.|:|||     :.|:||.|.|..|
 Frog   397 MLLDPTNPSAGTAKIDKQ---EKVKLNFDMTASPKILMSKPVLSGGTGRRISLSDMPRSPMST 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
emsNP_731868.1 Homeodomain 389..445 CDD:459649
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.