DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and EHD2

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_567299.2 Gene:EHD2 / 825902 AraportID:AT4G05520 Length:546 Species:Arabidopsis thaliana


Alignment Length:493 Identity:125/493 - (25%)
Similarity:227/493 - (46%) Gaps:72/493 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 AQEDEPQTDGAQDAADDDDDTKPEDELLWEGHIPENRRSRQHITELLQLDEE------------- 520
            |||....|   .|......|.|..:..:.||  .||..|:|.::: ..:|.|             
plant    84 AQEGHEIT---SDLLKGSIDMKSVELPVLEG--LENVVSKQKVSK-TNVDVEDNVVTKPQVTAKT 142

  Fly   521 --FNARE--KATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPW 581
              |.::.  |...||..|: ..:||:|...:||||..|::.|.::...:..:..:||:::.:|.:
plant   143 PWFKSKSIIKPQVNVVTIV-DGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQY 206

  Fly   582 SGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLA--ADYTFAGLQKFGQ 644
            |.||::.:.:|...:| |.: ..|.||:...|.:.|.|.:...:.|..:|  ||..|.||..||.
plant   207 STGKTTFIKHLLGCDY-PGA-HIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGG 269

  Fly   645 GLEERLRGLKMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKLD 708
            ....:....:|...:|:::.:|:.||:|...|| :.|.:.|.....||..:.|:|.|::||.|||
plant   270 AFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTGVISWFASKCDMILLLFDPHKLD 334

  Fly   709 VGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWTH 773
            :..|.:.::..|:|.|.:.|::|||||.|..::|:||.|||:|::..::::.:...:|..|....
plant   335 ISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDK 399

  Fly   774 PYQDGAPA----RLLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVR--VRNHAKMVDCYL 828
            |..:.|..    .|...::...|.||    :.|.|::|...:..||...:.  :.:|.|      
plant   400 PINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIMSHLK------ 458

  Fly   829 NTFNNHKTLFGNKK---RIADDIIDH----PQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNP 886
               .....:.|..|   |:.|::.:.    .:.:|:..|          |.|..|.:|:......
plant   459 ---KEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAG----------DFPSVEHFREVLGGYN 510

  Fly   887 LYEFKKLRDTCTYFRGCPITKLDLAIAYELPELAGKYK 924
            :.:|:||:...       |..:|..:.|::|:|..|::
plant   511 IDKFEKLKPKM-------IQAVDDMLGYDIPDLLKKFR 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110
TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..570 CDD:465295 9/30 (30%)
EHD 574..813 CDD:206740 73/249 (29%)
EHD2NP_567299.2 EH 20..86 CDD:238009 1/1 (100%)
EHD_N 163..195 CDD:465295 9/31 (29%)
EHD 199..443 CDD:206740 71/245 (29%)
DUF5600 435..537 CDD:465667 22/127 (17%)
Blue background indicates that the domain is not in the aligned region.

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