DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9297 and Ehd4

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_647540.1 Gene:Ehd4 / 192204 RGDID:628883 Length:541 Species:Rattus norvegicus


Alignment Length:382 Identity:107/382 - (28%)
Similarity:193/382 - (50%) Gaps:19/382 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   517 LDEEFNAREKATD-NVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGP 580
            :..:...||::.. :..:.:...::.:|:..|.|||..|::.:..:....|.:..:||:||.:|.
  Rat     5 MGRQAGGRERSGGMDAVQTVTGGLRSLYQRKVLPLEEAYRFHEFHSPALEDADFENKPMILLVGQ 69

  Fly   581 WSGGKSSILNYLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFG 643
            :|.||::.:.||.:.::.  .:|.|.||:...|..:|:|.......|..|..|  ..|..|.:||
  Rat    70 YSTGKTTFIRYLLEQDFP--GMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFG 132

  Fly   644 QGLEERLRGLKMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKL 707
            .....|....::.:::|:.::|::.||||...|| :||.:.|....|||.:|.|.|.|::|..||
  Rat   133 NAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKL 197

  Fly   708 DVGPETEAILDQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWT 772
            |:..|....:...:|::.:.|::|||||.|..::|:||.|||:|::..::::.:...:|..|.|.
  Rat   198 DISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWA 262

  Fly   773 HPYQDGAPARLLLAQERAFLRDLRTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTL 837
            .|.|:....||..|:.:...||:::...|....|:....:.|...:.||.::. ||.  ....::
  Rat   263 QPLQNTDNRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIIS-YLK--KEMPSM 324

  Fly   838 FG--NKKRIADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKK 892
            ||  ||||  :.|...|:   ||..|.....||..|.|:.:..::...   .|:|.|
  Rat   325 FGKENKKR--ELIFRLPE---IYVQLQREYQISAGDFPEVKAMQEQLE---NYDFTK 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110
TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..570 CDD:465295 7/30 (23%)
EHD 574..813 CDD:206740 73/241 (30%)
Ehd4NP_647540.1 EHD_N 27..59 CDD:465295 7/31 (23%)
EHD 63..303 CDD:206740 73/241 (30%)
DUF5600 292..397 CDD:465667 24/93 (26%)
EH 441..534 CDD:197477
Blue background indicates that the domain is not in the aligned region.

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