DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9297 and ehd4

DIOPT Version :10

Sequence 1:NP_788674.1 Gene:CG9297 / 41688 FlyBaseID:FBgn0038181 Length:952 Species:Drosophila melanogaster
Sequence 2:NP_001096442.2 Gene:ehd4 / 100125054 XenbaseID:XB-GENE-1000711 Length:537 Species:Xenopus tropicalis


Alignment Length:374 Identity:99/374 - (26%)
Similarity:183/374 - (48%) Gaps:22/374 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   526 KATDNVAEIILRDIKRIYENAVKPLETLYKYRDLSNRHFSDPEIFSKPLILFMGPWSGGKSSILN 590
            |...:|.:.:...::.:|...:.|||..|::.:..:....:.:..:.|::|.:|.:|.||::.:.
 Frog    11 KGQQDVLQTVTGGLQALYTGKLLPLEEHYRFHEFHSPALEEADFKNLPMVLLVGQYSTGKTTFIR 75

  Fly   591 YLTDNEYTPNSLRTGAEPSPAYFNILMWGNETEVLDGTQLAAD--YTFAGLQKFGQGLEERLRGL 653
            ||.:.::.  .:|.|.||:...|..:|:|.:...:.|..|..|  ..|..|..||.....|....
 Frog    76 YLLEQDFP--GMRIGPEPTTDSFIAVMYGEKEGSIPGNALVVDPKKPFRKLNSFGNAFLNRFMCS 138

  Fly   654 KMKSKILEKVNIVEIPGILEVRKQ-VSRVFPFNDACQWFIDRADIIFLVYDPAKLDVGPETEAIL 717
            ::.:::|..::|::.||||...|| :||.:.|....|||.:|.|.|.|::|..|||:..|....:
 Frog   139 QLPNEVLRSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAI 203

  Fly   718 DQLKGREYQTRIILNKADTVKPEELLRVQGALIWNISPLMSSAQPPLMYTTSLWTHPYQDGAPAR 782
            ...:|::.:.|::|||||.|..::|:||.|||:|::..::::.:...:|..|.|:.|.|:....:
 Frog   204 RAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVVRVYIGSFWSKPLQNTENRK 268

  Fly   783 LLLAQERAFLRDL----RTAIDKRIEHKIASARRFAVRVRNHAKMVDCYLNTFNNHKTLFGNKKR 843
            |...:.:...||:    |.|..:::...|..||...|    ||.::.   :.......:||...:
 Frog   269 LFEMEAQDLFRDIQSLPRNAALRKLNDLIKRARLAKV----HAYIIS---HLKKEMPAVFGKDTK 326

  Fly   844 IADDIIDHPQNYHIYEGLSTLTNISRYDLPDPEVYRDFFRLNPLYEFKK 892
            ..:.|...|:   ||..|.....||..|.||.:..:....   :|:|.|
 Frog   327 KKELISRLPE---IYIQLQREHQISPGDFPDVKKMQQQLE---MYDFSK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9297NP_788674.1 MSCRAMM_ClfA <93..367 CDD:468110
TSP3 repeat_long 167..205 CDD:275366
EHD_N 539..570 CDD:465295 5/30 (17%)
EHD 574..813 CDD:206740 73/245 (30%)
ehd4NP_001096442.2 EHD_N 23..54 CDD:465295 5/30 (17%)
EHD 59..299 CDD:206740 71/241 (29%)
DUF5600 287..393 CDD:465667 22/96 (23%)
EH 438..530 CDD:197477
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.