DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment omd and ints5

DIOPT Version :10

Sequence 1:NP_650303.1 Gene:omd / 41674 FlyBaseID:FBgn0038168 Length:994 Species:Drosophila melanogaster
Sequence 2:XP_002943024.2 Gene:ints5 / 100492752 XenbaseID:XB-GENE-6040594 Length:938 Species:Xenopus tropicalis


Alignment Length:1073 Identity:256/1073 - (23%)
Similarity:411/1073 - (38%) Gaps:280/1073 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QLKHFIETV--SNGHSCPQLLTSPNLIKLALGFLEELPATRDIVFEYFALLAEISVQLYVSPEMA 71
            |:|.|:...  .:||.    |:..:..:.:|..|:.||..|..|.|:...:...||..::|..  
 Frog    20 QIKSFLSGTDPQHGHK----LSPRDHARCSLLLLQCLPPARHAVLEHLRTVFHDSVSSFLSER-- 78

  Fly    72 DPKTGMPVSQVKLAGNRQQQQRAPE-------YEAFNLVKTALQSLVWKGPPAWSPLIANWSLEL 129
            |.:..:|.|.       ..|:|.|.       .|....|:..|:..:...|.||:|||:.||:||
 Frog    79 DSQDALPPSS-------SSQRRPPPPPSTQGLDEVTLEVQRVLEEFIKLNPRAWAPLISAWSIEL 136

  Fly   130 VAKLSDKYTQRR-MTITASCN----YWLECSAMHGLMTLINSCFRKLTQPEEEACVEIMLNAFHR 189
            :.:||.|:..|: |..:||.|    .|:.|.|...||.:...|...:.....:|||:.:|:...:
 Frog   137 MGQLSSKHAGRQGMPHSASLNELLQLWMSCGATRVLMDIYTHCLSTMIGSCPDACVDALLDTSVQ 201

  Fly   190 FPMTFDWIVARLGGCFPYKIIMQILQCGIKRFVDDYRCH-------------LDSEAGILDYMTS 241
            ....|||:||.:|..||..||.::|.||:|    |:..|             |.|..|||.:::|
 Frog   202 HSPHFDWVVAHIGNSFPSTIISRVLSCGLK----DFC
AHSSPTDTADKRVPKLGSVVGILGHLSS 262

  Fly   242 CHEQHLRAAFREMLREGFAPKKPLDVAVVPFLL----ITTNYSDTILQSLVNVLVEIYTEDM--- 299
            .|.|.:|.....|..|...|......|.:|:||    ::.:...|:.|.||:.|.......:   
 Frog   263 RHGQSIRQEILRMFHESLRPGSKQQRATLPYLLQLAALSPSLLGTVCQDLVDSLKPATLSQLQQH 327

  Fly   300 CEVIVQK-------------------AP----LWLSNKMFAGMQPT----LNNAVLRLNERGATL 337
            |..:.::                   ||    ..|...|.|.:..|    ::::|....:|...|
 Frog   328 CSTLPREELDNMLNLSVHLACQTSAGAPRLLRFLLDTAMPASVITTPGLAVHDSVREACDRIVRL 392

  Fly   338 LLTAAKMAEKYVW--------------CQDFLDNSMQELEQWVLNQRNFPLLADLAYEETKYMLW 388
            ||.:   .:|.|:              ...||:.....|.:         |.|::...|.|..||
 Frog   393 LLLS---LQKQVYGRPGSRGTSEVQPRAVPFLEAMRGHLPE---------LCAEMLRLERKRHLW 445

  Fly   389 KSCLSTNLFEQQTAVRLLLVVSSQHPNIYYQTISQLLKKSYAQNPNGIGALIRLLG-GQSGMVNF 452
                                        .:|.|..|.  .|:..|....||..||. .||.    
 Frog   446 ----------------------------IHQLIGLLC--IYSSPPCSSEALCILLTLAQSS---- 476

  Fly   453 PGFTPGFKMVLEDITLDVQVNNRLPVPPGTPTEAFNTFSNLNILARMHKSKNVAPYIKAQHLNQA 517
                       |::.|.||::..|.             |::..||:...:::||..    |....
 Frog   477 -----------EELGLAVQLHAVLS-------------SSVQGLAQAAVTRSVAQI----HAGAL 513

  Fly   518 LNECLPKILQIFDCTVNKLVLRIDRDAAERIADKFRAQQSKNSNNNNELCNGKDYGKRTKLEPGE 582
            .::|..::||..     .||::.:..:.                       |::.|         
 Frog   514 TDKCALQLLQNL-----ALVVQCEEGSM-----------------------GREVG--------- 541

  Fly   583 DKVDDEDATRMRLAHLIVD---LLNNIEAG--SRTTVLR---------TPLVLKLATLSVKYFFV 633
                      |.|:..:.|   ||.:.|.|  ....:|.         .|..|.:...|..:|  
 Frog   542 ----------MALSEYLSDFGQLLLHSEPGVCEAACILLCSCPLPTSIPPSQLHILIRSSSHF-- 594

  Fly   634 GLTEKTVIRRAAASHRSYTLLQRQCSARKIARTVCLRELVERALFYH---------------GHL 683
             |.....||.::....:..||.|.|......|...|.:|||.||  |               |..
 Frog   595 -LFRSMHIRSSSGVSSASRLLLRLCRVSSAGRKAVLNQLVEGAL--HEGNAGLFGGNRPSSTGPR 656

  Fly   684 LGQLEVYQLDELEIPEHEHLILQNLHTSSG---ANSNRSVLHSGIIGRGLRP---VLPPSERNCD 742
            ||.            :...|:..|.|..|.   :.|..||.|:|:||.||:|   .....|..|.
 Frog   657 LGN------------DTASLLESNSHLGSAVDFSGSVWSVFHAGVIGAGLKPEENSKQLGEEECT 709

  Fly   743 AEKQALYLKALNACCADLEKPN------NVEGYSLVSLLLVELVSTDVMYNGLPFPDEEFTRVTM 801
            ...|:| |..|..|||...:..      :.|....:::.|.|....||..:.|.:|.|:..|.|:
 Frog   710 ENTQSL-LSLLCHCCARKGEDGGQSTTLDPEAAKTLAVTLTENACPDVTNSELAWPPEDHARTTV 773

  Fly   802 ERDMLIRRAFINSPVLWAVLGLIAGHRPALCYSSVLLRALCATCLHHWRGKNVNRFQPTAANDEL 866
            :||:||.:.|..:|:|:.:|.|||..||||||.|||||.|.|..|.:|   ..:|.|.:.::...
 Frog   774 QRDLLIYKCFCQNPLLFQLLHLIAQGRPALCYCSVLLRGLLAVLLAYW---EASRHQDSVSSSWH 835

  Fly   867 MLCTKKMLQLLAMSQLIPPPLTNLHLIIEHFESAEIALLLRECIWNYLKDHVPSPALF-HVDNNG 930
            :..:.:::..:...||:||.|||:|.:.......|:.|||.. :|::::::.|.|..| .....|
 Frog   836 LKASCELVSCMGEGQLLPPALTNMHEMFSLLAPFEVRLLLLS-VWDFIQENGPFPQRFVFQSGRG 899

  Fly   931 LHWRNTNTQLAKVPPQYVDPLRHLMQRKLSTLG 963
            :..|:.:.:  ..|.:|:..:..::.|.:..||
 Frog   900 IFTRDFSRE--GDPAKYMSIVHSVLHRNVDRLG 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
omdNP_650303.1 INTS5_N 4..221 CDD:464341 67/225 (30%)
INTS5_C 229..962 CDD:464342 185/823 (22%)
ints5XP_002943024.2 INTS5_N 16..234 CDD:464341 68/230 (30%)
INTS5_C 249..929 CDD:464342 185/824 (22%)

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