DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9588 and Psmd9

DIOPT Version :10

Sequence 1:NP_650301.1 Gene:CG9588 / 41672 FlyBaseID:FBgn0038166 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_569114.2 Gene:Psmd9 / 161475 RGDID:621110 Length:222 Species:Rattus norvegicus


Alignment Length:211 Identity:89/211 - (42%)
Similarity:127/211 - (60%) Gaps:26/211 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LERLINAKKQLEAQINRNGQILAANDNVGMSGPLVDAEGFPRNDIDVYQVRLARQTIICLQNDHK 75
            ::.|:..|:::||||..|..:|.:...:||:.||||.||:||.|:|:||||.||..|||||||||
  Rat    23 IQELMRRKEEIEAQIKANYDVLESQKGIGMNEPLVDCEGYPRADVDLYQVRTARHNIICLQNDHK 87

  Fly    76 ELMNQIQTLLNQYHS--------EIATTDPELVNRASALDLDSDRSPGGANITDLAPARAIVVVN 132
            .||.|::..|:|.|:        ::|....|.:||..|.|     ||        |..:|...||
  Rat    88 ALMKQVEEALHQLHARDKEKQARDMAEAREEAMNRRLASD-----SP--------ALPKAFARVN 139

  Fly   133 LVSPDSPAERAGLCAGDAILRFGSINSGNFKGDLAQIGELVRNMQSQ--NVQLKVKRGEQQLDLI 195
            .:||.|||..|||...|.|:.|||:|:.||: .|..:|.:|::.:.:  ||.: ::|||:. .|.
  Rat   140 SISPGSPASIAGLQVDDEIVEFGSVNTQNFQ-SLQNVGSVVQHSEGKPLNVMV-IRRGEKH-QLR 201

  Fly   196 LVPKTWSGRGLLGCNI 211
            |.|..|:|:|||||||
  Rat   202 LTPTRWAGKGLLGCNI 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9588NP_650301.1 Nas2_N 11..90 CDD:465689 40/78 (51%)
RseP <130..>208 CDD:440513 33/79 (42%)
Psmd9NP_569114.2 Nas2_N 23..102 CDD:465689 40/78 (51%)
RseP <136..>214 CDD:440513 33/80 (41%)

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