Protein Alignment Rbp4 and SLIRP2

DIOPT Version :9

• Sequence 1: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Sequence 2: NP_649808.1
• Gene: SLIRP2 / 41021
• FlyBaseID: FBgn0037602
• Length: 91
• Species: Drosophila melanogaster
• Alignment Length: 85
• Identity: 23/85 - (27%)
• Similarity: 47/85 - (55%)
• Gaps: 1/85 - (1%)

  Fly   130 AGFMNSK-RIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKA 193
            :||:.|. ::|:|.|........:|.|||::|.||:.:::.||:.|..:.:||:.|....:...|
  Fly     3 SGFVRSSYKLFVGNLPWTIGSKELRTYFSKYGHVANAEVVFDRQLGLSKHYGFVVFSQRDAFNSA 67

  Fly   194 LAPRKHWILQTLVEVKRSTQ 213
            .....|::...::.|:|:.:
  Fly    68 SNQNTHFLDGRVLTVQRANE 87

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621
		RRM2_hnRNPA_like	137..209	CDD:240774	18/71 (25%)
SLIRP2	NP_649808.1	RRM_SLIRP	11..83	CDD:240688	18/71 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464007
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930